Strain Fitness in Shewanella loihica PV-4 around Shew_0014
Experiment: Bacitracin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
16,616 | + | Shew_0013 | 0.79 | +0.2 | |
16,625 | - | Shew_0013 | 0.80 | -0.3 | |
16,641 | - | Shew_0013 | 0.80 | -0.2 | |
16,696 | + | Shew_0013 | 0.82 | -0.5 | |
16,765 | + | Shew_0013 | 0.84 | -0.2 | |
16,779 | - | Shew_0013 | 0.84 | -0.7 | |
17,000 | + | +0.2 | |||
17,118 | + | -0.3 | |||
17,126 | - | -0.1 | |||
17,236 | - | +0.0 | |||
17,731 | - | Shew_0014 | 0.35 | -0.3 | |
17,744 | - | Shew_0014 | 0.38 | -0.5 | |
18,105 | + | -2.1 | |||
18,144 | - | -0.0 | |||
18,181 | + | -0.3 |
Or see this region's nucleotide sequence