Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2695

Experiment: aerobic shaking 48 hr copy A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy A
3,358,064	-		BT2694	0.60	-0.9
3,358,065	+		BT2694	0.60	-3.2
3,358,065	+		BT2694	0.60	-0.7
3,358,066	-		BT2694	0.60	-1.3
3,358,068	+		BT2694	0.60	-0.8
3,358,135	+		BT2694	0.64	+0.1
3,358,136	-		BT2694	0.64	-1.6
3,358,136	-		BT2694	0.64	-1.8
3,358,245	-		BT2694	0.69	-1.1
3,358,245	-		BT2694	0.69	-0.1
3,358,333	+		BT2694	0.74	-2.1
3,358,334	-		BT2694	0.74	-0.5
3,358,341	+		BT2694	0.74	-1.6
3,358,350	+		BT2694	0.74	-1.2
3,358,435	-		BT2694	0.79	-1.1
3,358,448	+		BT2694	0.79	-0.7
3,358,449	-		BT2694	0.79	-0.1
3,358,466	+		BT2694	0.80	+0.9
3,358,467	-		BT2694	0.80	-2.3
3,358,505	+		BT2694	0.82	-0.2
3,358,506	-		BT2694	0.82	-1.5
3,358,509	+		BT2694	0.82	-1.9
3,358,521	-		BT2694	0.83	-0.1
3,358,527	-		BT2694	0.83	+1.5
3,358,527	-		BT2694	0.83	-1.1
3,358,601	+		BT2694	0.87	-1.9
3,358,770	+				-2.9
3,358,776	+				-0.9
3,358,778	+				-0.9
3,358,779	-				-2.1
3,358,779	-				-3.4
3,358,779	-				-1.5
3,358,783	-				-1.1
3,358,783	-				-1.4
3,358,810	+				-4.0
3,358,811	-				-1.0
3,358,849	+				-1.9
3,358,858	-				+1.5
3,358,858	-				-0.5
3,358,893	+				+0.1
3,358,904	-				-2.4
3,358,919	-				-0.7
3,358,919	-				-0.7
3,358,958	+				-3.5
3,358,972	+				-2.1
3,358,975	+				-1.2
3,359,016	-				-4.2
3,359,025	+				-2.2
3,359,026	-				-1.7
3,359,026	-				+0.5
3,359,053	-		BT2695	0.11	-0.7
3,359,053	-		BT2695	0.11	-1.4
3,359,057	+		BT2695	0.12	-0.1
3,359,114	-		BT2695	0.20	+0.7
3,359,151	-		BT2695	0.26	-2.2
3,359,277	-		BT2695	0.45	-0.2
3,359,277	-		BT2695	0.45	-1.5
3,359,309	+		BT2695	0.49	+0.8
3,359,310	-		BT2695	0.50	+0.5
3,359,334	+		BT2695	0.53	-0.9
3,359,359	-		BT2695	0.57	+0.0
3,359,363	-		BT2695	0.58	-1.7
3,359,418	+		BT2695	0.66	-0.1
3,359,419	-		BT2695	0.66	-0.3
3,359,495	-		BT2695	0.77	-0.3
3,359,495	-		BT2695	0.77	-0.9
3,359,572	+		BT2695	0.89	-1.4
3,359,573	-		BT2695	0.89	-2.6
3,359,613	-				-1.7
3,359,625	+				-1.1
3,359,626	-				-2.1
3,359,671	+				-0.7
3,359,688	-				-0.1
3,359,765	-		BT2696	0.34	+0.1
3,359,830	-		BT2696	0.68	-5.1
3,359,830	-		BT2696	0.68	-2.2
3,359,830	-		BT2696	0.68	-1.3
3,359,841	+		BT2696	0.73	-1.2
3,359,841	+		BT2696	0.73	-2.2
3,359,849	+		BT2696	0.77	-2.4
3,359,849	+		BT2696	0.77	-0.1
3,359,964	+				-1.0
3,359,997	+				-4.7
3,359,998	-				+0.1
3,360,043	+				-1.5
3,360,043	+				-0.9
3,360,044	-				-3.6
3,360,048	+				-0.9
3,360,048	+				-0.5
3,360,049	-				-2.5
3,360,051	+				-1.7
3,360,065	+				+1.5
3,360,069	-				-1.7
3,360,102	-				-0.1
3,360,132	+				-2.4
3,360,133	-				-0.8
3,360,145	+				-0.5
3,360,182	+				-0.2
3,360,183	-				-0.4
3,360,199	-				-0.9
3,360,199	-				-3.1
3,360,203	+				-0.0
3,360,203	+				-1.0
3,360,204	-				-0.5
3,360,246	+				-1.4
3,360,247	-				-2.9
3,360,249	+				-0.1
3,360,269	+				+0.3
3,360,270	-				-1.5
3,360,270	-				-0.5
3,360,272	+				-1.4
3,360,272	+				-1.5
3,360,273	-				-0.7
3,360,273	-				-1.1
3,360,273	-				-1.7
3,360,275	-				-0.1
3,360,303	-				-3.3
3,360,321	+				-1.3
3,360,406	-				-2.5
3,360,424	+				-0.9
3,360,428	-				-1.5
3,360,438	+				-1.3
3,360,453	-				+0.5
3,360,510	-				-1.8
3,360,530	+				-1.3
3,360,531	-				-1.3
3,360,534	+				-0.9
3,360,534	+				-0.5
3,360,534	+				+0.1
3,360,535	-				-4.2
3,360,535	-				-0.6
3,360,546	-				+0.2
3,360,576	-				-2.6
3,360,589	+				+0.5
3,360,592	+				+0.5
3,360,612	+				-1.3