Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2542

Experiment: aerobic shaking 48 hr copy A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy A
3,175,555	+		BT2541	0.65	-0.8
3,175,876	+		BT2541	0.77	-2.2
3,175,899	+		BT2541	0.78	-2.6
3,175,923	+		BT2541	0.78	-0.9
3,175,941	+		BT2541	0.79	+0.7
3,175,941	+		BT2541	0.79	+1.5
3,176,014	+		BT2541	0.82	-0.0
3,176,095	+		BT2541	0.85	+1.6
3,176,095	+		BT2541	0.85	-0.0
3,176,122	+		BT2541	0.86	+0.2
3,176,127	+		BT2541	0.86	+0.2
3,176,171	+		BT2541	0.88	-1.8
3,176,197	+		BT2541	0.89	-0.7
3,176,209	+		BT2541	0.89	+0.4
3,176,209	+		BT2541	0.89	-0.9
3,176,209	+		BT2541	0.89	+1.0
3,176,431	+				-2.7
3,176,431	+				-2.7
3,176,488	+				-1.0
3,176,528	+				-0.6
3,176,557	+				-1.4
3,176,585	+		BT2542	0.12	+2.6
3,176,656	+		BT2542	0.23	+0.5
3,176,900	+		BT2542	0.62	+2.0
3,176,900	+		BT2542	0.62	+1.6
3,176,900	+		BT2542	0.62	+0.3
3,176,919	+		BT2542	0.65	+0.6
3,176,934	+		BT2542	0.68	+3.1
3,176,934	+		BT2542	0.68	+0.3
3,176,977	+		BT2542	0.75	+3.0
3,177,053	+		BT2542	0.87	+1.7
3,177,074	+				+1.3
3,177,140	+				-2.4
3,177,144	+				-2.3
3,178,082	+				-0.4