Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2308

Experiment: aerobic shaking 48 hr copy A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy A
2,882,503	+				-3.0
2,882,504	-				-0.5
2,882,687	-				-0.5
2,882,687	-				-1.2
2,882,818	+		BT2307	0.13	-0.9
2,882,857	+		BT2307	0.19	-1.5
2,882,906	-		BT2307	0.27	-1.0
2,882,968	+		BT2307	0.37	-2.1
2,882,968	+		BT2307	0.37	-0.9
2,882,968	+		BT2307	0.37	-2.9
2,882,968	+		BT2307	0.37	-1.5
2,883,117	-		BT2307	0.61	+1.5
2,883,125	+		BT2307	0.62	-1.2
2,883,126	-		BT2307	0.62	-2.1
2,883,133	+		BT2307	0.63	+0.1
2,883,134	-		BT2307	0.64	+0.3
2,883,134	-		BT2307	0.64	-1.1
2,883,134	-		BT2307	0.64	-0.9
2,883,134	-		BT2307	0.64	-1.0
2,883,198	+		BT2307	0.74	-0.1
2,883,198	+		BT2307	0.74	+0.5
2,883,228	-		BT2307	0.79	-2.1
2,883,228	-		BT2307	0.79	+0.1
2,883,228	-		BT2307	0.79	-2.5
2,883,256	+		BT2307	0.83	-0.1
2,883,257	-		BT2307	0.83	-1.5
2,883,257	-		BT2307	0.83	+2.0
2,883,296	+		BT2307	0.90	-3.2
2,883,297	-		BT2307	0.90	-3.2
2,883,614	+		BT2308	0.18	-1.3
2,883,615	-		BT2308	0.18	-0.5
2,883,615	-		BT2308	0.18	-2.3
2,883,615	-		BT2308	0.18	-1.5
2,883,626	+		BT2308	0.19	-0.8
2,883,716	-		BT2308	0.30	-0.5
2,883,737	-		BT2308	0.33	+3.1
2,883,801	-		BT2308	0.40	-2.9
2,883,891	+		BT2308	0.51	-1.5
2,883,891	+		BT2308	0.51	-2.1
2,883,891	+		BT2308	0.51	-1.3
2,883,892	-		BT2308	0.51	-0.1
2,883,941	-		BT2308	0.57	-2.2
2,883,945	+		BT2308	0.57	-3.3
2,883,946	-		BT2308	0.58	+0.2
2,884,077	+		BT2308	0.73	+0.0
2,884,078	-		BT2308	0.73	-2.2
2,884,161	+		BT2308	0.83	-1.5
2,884,161	+		BT2308	0.83	-1.6
2,884,162	-		BT2308	0.83	-1.8
2,884,336	-				+0.2
2,884,336	-				-3.0
2,884,460	+		BT2309	0.42	-1.1
2,884,461	-		BT2309	0.43	-0.3
2,884,504	-		BT2309	0.58	-1.1
2,884,558	+		BT2309	0.77	-4.6
2,884,700	+				-0.3
2,884,700	+				-1.6
2,884,700	+				-2.5
2,884,705	+				-0.8
2,884,706	-				-2.2
2,884,833	+		BT2310	0.26	+1.2
2,884,858	-		BT2310	0.31	-2.3
2,884,902	+		BT2310	0.40	-0.9
2,884,998	+		BT2310	0.58	-2.6
2,885,000	+		BT2310	0.59	-1.3
2,885,009	+		BT2310	0.60	-2.3
2,885,048	+		BT2310	0.68	-2.1
2,885,049	-		BT2310	0.68	-0.1
2,885,049	-		BT2310	0.68	+0.0
2,885,051	+		BT2310	0.69	-3.5
2,885,168	-				-1.1
2,885,237	-				-1.6
2,885,237	-				-1.3
2,885,298	+				-1.1