Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1775

Experiment: aerobic shaking 48 hr copy A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy A
2,206,559	-		BT1774	0.71	-2.0
2,206,564	-		BT1774	0.71	-0.9
2,206,713	+		BT1774	0.76	-0.9
2,206,714	-		BT1774	0.76	-0.4
2,206,719	+		BT1774	0.76	+0.3
2,206,797	+		BT1774	0.78	-3.7
2,206,873	+		BT1774	0.81	-1.6
2,206,932	-		BT1774	0.83	-0.9
2,206,935	+		BT1774	0.83	-2.3
2,207,051	-		BT1774	0.86	-0.0
2,207,074	+		BT1774	0.87	+0.3
2,207,074	+		BT1774	0.87	-0.7
2,207,189	+				-1.4
2,207,237	-				-1.5
2,207,251	-				-1.9
2,207,317	+				+1.1
2,207,318	-				-1.4
2,207,329	+				-1.6
2,207,334	-				+0.6
2,207,362	+				+2.1
2,207,362	+				-3.0
2,207,512	+				-1.2
2,207,744	-		BT1775	0.12	-1.5
2,207,763	+		BT1775	0.13	-0.7
2,207,940	-		BT1775	0.23	-0.4
2,207,952	+		BT1775	0.24	-1.5
2,208,048	+		BT1775	0.29	+0.5
2,208,051	+		BT1775	0.29	-0.9
2,208,075	+		BT1775	0.31	-2.8
2,208,142	+		BT1775	0.35	-1.9
2,208,220	-		BT1775	0.39	+0.1
2,208,242	+		BT1775	0.41	-1.2
2,208,262	+		BT1775	0.42	-2.5
2,208,489	+		BT1775	0.55	-2.9
2,208,489	+		BT1775	0.55	-2.3
2,208,559	-		BT1775	0.59	-3.0
2,208,609	-		BT1775	0.62	+0.1
2,208,610	+		BT1775	0.62	-0.7
2,208,625	+		BT1775	0.63	-0.7
2,208,625	+		BT1775	0.63	+0.6
2,208,625	+		BT1775	0.63	-0.7
2,208,628	-		BT1775	0.63	-1.4
2,208,631	+		BT1775	0.63	-1.2
2,208,632	-		BT1775	0.63	-1.2
2,208,632	-		BT1775	0.63	-1.8
2,208,634	-		BT1775	0.64	-0.8
2,208,634	-		BT1775	0.64	-0.4
2,208,635	+		BT1775	0.64	-1.3
2,208,635	+		BT1775	0.64	-0.4
2,208,709	+		BT1775	0.68	-2.3
2,208,718	+		BT1775	0.68	-0.7
2,208,723	+		BT1775	0.69	-1.2
2,208,723	+		BT1775	0.69	-1.0
2,208,724	-		BT1775	0.69	-0.7
2,208,724	-		BT1775	0.69	-1.2
2,208,732	+		BT1775	0.69	-0.7
2,208,920	+		BT1775	0.80	+0.1
2,208,921	-		BT1775	0.80	-1.2
2,208,921	-		BT1775	0.80	-1.4
2,208,939	+		BT1775	0.81	-1.2
2,208,953	+		BT1775	0.82	-1.5
2,208,953	+		BT1775	0.82	-0.9
2,209,015	+		BT1775	0.86	-1.3
2,209,028	-		BT1775	0.87	-2.8
2,209,152	-				-2.3
2,209,207	+				-0.9
2,209,208	-				-0.7
2,209,229	-				+1.6
2,209,244	+				+1.1
2,209,245	-				-2.5
2,209,248	-				-0.4
2,209,318	-				+0.5
2,209,378	+				-2.0
2,209,411	+				-0.9
2,209,412	-				+0.6
2,209,522	+				+0.1
2,209,547	+				-1.0
2,209,548	-				+0.1
2,209,575	+				-0.5
2,209,575	+				-1.7
2,209,587	+				-1.9
2,209,659	+				-2.1
2,209,662	+				+1.6
2,209,663	-				-0.7
2,209,673	-				-0.4
2,209,682	+				+1.0
2,209,715	+				-2.7
2,209,793	-				-3.1
2,209,867	+				-0.9
2,209,896	+				-2.9
2,209,900	+				-0.4
2,209,967	-				-1.5
2,210,077	-				-1.1
2,210,092	-				-2.8
2,210,099	+				-1.5
2,210,257	+				-1.5