Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1461

Experiment: aerobic shaking 48 hr copy A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy A
1,800,169	+				-1.1
1,800,361	-				+0.7
1,800,393	-				+0.5
1,800,399	-				-1.5
1,800,462	+				-0.1
1,800,462	+				-1.0
1,800,463	-				-0.6
1,800,495	+				-2.6
1,800,816	+				-1.9
1,800,821	+				-0.3
1,800,834	-				-0.6
1,800,840	+				+1.2
1,800,845	-				-1.4
1,800,845	-				-1.4
1,800,869	-				-1.1
1,800,914	-				-0.9
1,800,916	+				-3.2
1,800,919	-				-2.6
1,800,920	+				+0.7
1,801,005	+				+0.5
1,801,010	+				-2.6
1,801,048	+				+0.1
1,801,048	+				-0.6
1,801,092	+				-2.2
1,801,183	+		BT1461	0.19	-2.3
1,801,207	-		BT1461	0.26	+0.7
1,801,217	-		BT1461	0.28	+0.1
1,801,232	+		BT1461	0.33	+1.4
1,801,291	+		BT1461	0.50	+2.9
1,801,292	-		BT1461	0.50	+0.5
1,801,300	+		BT1461	0.52	+0.1
1,801,322	-		BT1461	0.59	+1.1
1,801,322	-		BT1461	0.59	+0.1
1,801,324	+		BT1461	0.59	-2.9
1,801,361	+		BT1461	0.70	+0.5
1,801,371	-		BT1461	0.73	-0.8
1,801,372	+		BT1461	0.73	-2.7
1,801,491	+				-3.0
1,801,517	+				+0.7
1,801,518	-				-1.8
1,801,561	-				-0.6
1,801,598	-				-0.9
1,801,603	-				-1.6
1,801,603	-				-0.1
1,801,604	+				+0.7
1,801,607	-				-2.3
1,801,748	+				+1.7
1,801,774	+				-0.4
1,801,775	-				+1.7
1,801,797	-				-1.2
1,801,954	-		BT1462	0.34	-0.8
1,801,961	+		BT1462	0.36	-3.0
1,802,116	+		BT1462	0.70	-1.6
1,802,182	+		BT1462	0.85	-1.6
1,802,203	-		BT1462	0.90	-1.5
1,802,276	-				-1.5
1,802,319	-				-0.5
1,802,433	-				+1.0