Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1064

Experiment: aerobic shaking 48 hr copy A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy A
1,351,151	+		BT1063	0.45	-1.8
1,351,158	-		BT1063	0.45	+0.6
1,351,158	-		BT1063	0.45	-0.5
1,351,158	-		BT1063	0.45	+1.8
1,351,159	+		BT1063	0.45	-0.6
1,351,159	+		BT1063	0.45	-0.8
1,351,160	-		BT1063	0.45	+2.3
1,351,193	-		BT1063	0.47	-1.7
1,351,196	+		BT1063	0.47	-1.3
1,351,223	+		BT1063	0.49	+0.6
1,351,242	-		BT1063	0.50	-1.6
1,351,244	+		BT1063	0.50	-0.3
1,351,244	+		BT1063	0.50	-0.6
1,351,263	+		BT1063	0.51	-1.9
1,351,308	-		BT1063	0.54	-0.1
1,351,334	+		BT1063	0.55	+0.2
1,351,365	-		BT1063	0.57	-1.6
1,351,396	+		BT1063	0.59	+0.8
1,351,438	-		BT1063	0.62	+0.2
1,351,451	+		BT1063	0.62	-0.8
1,351,551	-		BT1063	0.68	-1.2
1,351,559	+		BT1063	0.69	-1.8
1,351,581	-		BT1063	0.70	+1.2
1,351,760	+		BT1063	0.81	-0.2
1,351,948	-				-0.6
1,352,065	-				-0.8
1,352,083	+				+0.8
1,352,283	+		BT1064	0.13	-1.0
1,352,473	+		BT1064	0.29	-1.4
1,352,624	+		BT1064	0.42	+1.0
1,352,626	+		BT1064	0.42	+2.2
1,352,626	+		BT1064	0.42	-0.8
1,352,905	-		BT1064	0.66	+0.2
1,352,934	-		BT1064	0.68	+1.8
1,353,054	+		BT1064	0.79	-1.2
1,353,118	+		BT1064	0.84	-0.2
1,353,119	-		BT1064	0.84	-0.6
1,353,126	+		BT1064	0.85	-0.6
1,353,131	+		BT1064	0.85	-0.6
1,353,132	-		BT1064	0.85	-0.0
1,353,250	-				-0.2
1,353,253	+				-1.8
1,353,253	+				-0.2
1,353,253	+				-2.8
1,353,321	+				-3.1
1,353,372	-		BT1065	0.24	-0.2
1,353,416	+		BT1065	0.36	+2.3
1,353,416	+		BT1065	0.36	-0.2
1,353,504	-		BT1065	0.60	-1.7
1,353,542	-		BT1065	0.71	+0.4
1,353,549	+		BT1065	0.72	-1.2
1,353,560	+		BT1065	0.75	-0.1
1,353,651	+				-0.3
1,353,657	-				-2.2
1,353,673	+				-0.8
1,353,709	+				-2.2
1,353,766	+		BT1066	0.19	+1.2
1,353,773	+		BT1066	0.20	-2.0
1,353,792	+		BT1066	0.23	-0.6
1,353,859	+		BT1066	0.35	-0.0
1,353,890	+		BT1066	0.40	-2.7
1,353,943	+		BT1066	0.50	+0.2
1,353,969	-		BT1066	0.54	+0.8
1,354,060	+		BT1066	0.70	-1.7
1,354,124	+		BT1066	0.81	-2.4
1,354,140	+		BT1066	0.84	-0.2
1,354,140	+		BT1066	0.84	-1.7
1,354,212	+				-1.4
1,354,302	+				-3.2