Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0994

Experiment: aerobic shaking 48 hr copy A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	aerobic shaking 48 hr copy A
1,228,516	-		BT0993	0.81	-0.1
1,228,529	+		BT0993	0.82	-2.1
1,228,588	+		BT0993	0.84	-0.6
1,228,597	+		BT0993	0.84	+0.2
1,228,740	+				+0.2
1,228,815	+				-0.3
1,228,880	-				-1.3
1,229,106	-				-0.8
1,229,110	+				-0.4
1,229,110	+				+0.7
1,229,191	+				-1.3
1,229,255	-				-1.7
1,229,280	+				-0.8
1,229,399	-				+0.3
1,229,432	+				-1.4
1,229,444	+				+0.7
1,229,528	-				-2.3
1,229,569	+				+2.3
1,229,667	-		BT0994	0.13	-0.3
1,229,669	+		BT0994	0.13	-2.3
1,229,769	-		BT0994	0.19	-1.3
1,229,875	-		BT0994	0.26	+2.5
1,229,961	+		BT0994	0.32	-1.4
1,230,168	+		BT0994	0.46	-1.8
1,230,234	-		BT0994	0.50	-0.3
1,230,234	-		BT0994	0.50	-0.8
1,230,242	-				-0.8
1,230,377	+		BT0994	0.60	-2.1
1,230,425	-		BT0994	0.63	-1.3
1,230,448	+		BT0994	0.65	-0.8
1,230,449	-		BT0994	0.65	+1.7
1,230,545	-		BT0994	0.71	+1.7
1,230,545	-		BT0994	0.71	-2.0
1,230,576	-		BT0994	0.73	-1.3
1,230,576	-		BT0994	0.73	-2.6
1,230,623	+		BT0994	0.76	-1.7
1,230,881	-				-1.7
1,231,097	+		BT0995	0.15	+0.7
1,231,109	-		BT0995	0.16	+0.3
1,231,168	+		BT0995	0.23	-0.3
1,231,195	+		BT0995	0.26	-2.1
1,231,276	-				-0.6
1,231,277	+		BT0995	0.36	+1.0
1,231,277	+		BT0995	0.36	-0.3
1,231,284	+		BT0995	0.37	+0.7
1,231,309	-		BT0995	0.40	-2.7
1,231,323	-		BT0995	0.41	-1.1
1,231,329	+		BT0995	0.42	+0.7
1,231,358	-		BT0995	0.45	+0.7
1,231,441	+		BT0995	0.55	+1.7
1,231,539	-		BT0995	0.67	+1.3
1,231,566	+		BT0995	0.70	+0.7
1,231,577	-		BT0995	0.71	-2.1
1,231,577	-		BT0995	0.71	-0.3
1,231,648	+		BT0995	0.80	-0.1
1,231,649	-		BT0995	0.80	-0.3
1,231,749	-				-0.6
1,231,780	-				-0.3
1,231,823	+				+0.2
1,231,847	-				+0.2
1,231,915	+				-0.6
1,231,915	+				-2.1
1,231,972	-				-2.2