Experiment: aerobic shaking 48 hr copy A
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0629 and BT0630 are separated by 30 nucleotides BT0630 and BT0631 are separated by 14 nucleotides BT0631 and BT0632 are separated by 485 nucleotides
BT0629: BT0629 - Mn2+ and Fe2+ transport protein (NCBI ptt file), at 775,419 to 776,675
BT0629
BT0630: BT0630 - exodeoxyribonuclease (NCBI ptt file), at 776,706 to 777,467
BT0630
BT0631: BT0631 - conserved hypothetical protein (NCBI ptt file), at 777,482 to 777,940
BT0631
BT0632: BT0632 - GTP-binding protein, membrane GTPase lepA (NCBI ptt file), at 778,426 to 780,207
BT0632
Position (kb) 776
777
778 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 775.814 kb on + strand, within BT0629 at 775.817 kb on + strand, within BT0629 at 775.931 kb on + strand, within BT0629 at 775.958 kb on - strand, within BT0629 at 776.010 kb on - strand, within BT0629 at 776.080 kb on + strand, within BT0629 at 776.080 kb on + strand, within BT0629 at 776.083 kb on + strand, within BT0629 at 776.120 kb on + strand, within BT0629 at 776.217 kb on - strand, within BT0629 at 776.292 kb on - strand, within BT0629 at 776.345 kb on + strand, within BT0629 at 776.347 kb on + strand, within BT0629 at 776.385 kb on - strand, within BT0629 at 776.405 kb on + strand, within BT0629 at 776.523 kb on - strand, within BT0629 at 776.610 kb on - strand at 776.617 kb on + strand at 776.622 kb on + strand at 776.627 kb on + strand at 776.871 kb on + strand, within BT0630 at 776.871 kb on + strand, within BT0630 at 776.872 kb on - strand, within BT0630 at 776.872 kb on - strand, within BT0630 at 776.918 kb on + strand, within BT0630 at 776.921 kb on + strand, within BT0630 at 777.016 kb on + strand, within BT0630 at 777.027 kb on + strand, within BT0630 at 777.099 kb on + strand, within BT0630 at 777.152 kb on + strand, within BT0630 at 777.153 kb on - strand, within BT0630 at 777.176 kb on + strand, within BT0630 at 777.264 kb on - strand, within BT0630 at 777.306 kb on - strand, within BT0630 at 777.306 kb on - strand, within BT0630 at 777.460 kb on + strand at 777.491 kb on - strand at 777.491 kb on - strand at 777.546 kb on + strand, within BT0631 at 777.569 kb on + strand, within BT0631 at 777.598 kb on + strand, within BT0631 at 777.731 kb on + strand, within BT0631 at 777.848 kb on - strand, within BT0631 at 778.015 kb on + strand at 778.076 kb on + strand at 778.077 kb on - strand at 778.119 kb on + strand at 778.129 kb on + strand at 778.193 kb on - strand at 778.266 kb on + strand at 778.295 kb on + strand at 778.312 kb on + strand at 778.313 kb on - strand at 778.343 kb on + strand at 778.351 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction aerobic shaking 48 hr copy A remove 775,814 + BT0629 0.31 -1.4 775,817 + BT0629 0.32 +0.2 775,931 + BT0629 0.41 -1.2 775,958 - BT0629 0.43 +0.2 776,010 - BT0629 0.47 -1.6 776,080 + BT0629 0.53 -0.2 776,080 + BT0629 0.53 -1.6 776,083 + BT0629 0.53 -3.3 776,120 + BT0629 0.56 -0.8 776,217 - BT0629 0.63 -0.6 776,292 - BT0629 0.69 -2.0 776,345 + BT0629 0.74 +1.2 776,347 + BT0629 0.74 -1.0 776,385 - BT0629 0.77 -0.6 776,405 + BT0629 0.78 -0.0 776,523 - BT0629 0.88 -0.2 776,610 - +0.8 776,617 + -2.1 776,622 + -2.1 776,627 + -1.0 776,871 + BT0630 0.22 -1.5 776,871 + BT0630 0.22 -0.4 776,872 - BT0630 0.22 +1.3 776,872 - BT0630 0.22 +2.2 776,918 + BT0630 0.28 -1.2 776,921 + BT0630 0.28 +1.8 777,016 + BT0630 0.41 -0.4 777,027 + BT0630 0.42 -1.6 777,099 + BT0630 0.52 -1.6 777,152 + BT0630 0.59 -1.8 777,153 - BT0630 0.59 +0.2 777,176 + BT0630 0.62 +0.8 777,264 - BT0630 0.73 -0.4 777,306 - BT0630 0.79 -0.2 777,306 - BT0630 0.79 -1.8 777,460 + +1.8 777,491 - +3.8 777,491 - +0.8 777,546 + BT0631 0.14 -0.8 777,569 + BT0631 0.19 -1.0 777,598 + BT0631 0.25 +0.2 777,731 + BT0631 0.54 -1.3 777,848 - BT0631 0.80 -0.4 778,015 + -0.1 778,076 + -0.5 778,077 - -0.8 778,119 + -1.4 778,129 + -0.2 778,193 - +1.4 778,266 + -1.9 778,295 + -0.9 778,312 + -0.6 778,313 - -0.2 778,343 + -0.2 778,351 + +0.2
Or see this region's nucleotide sequence