Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3365

Experiment: apoplastic; Lima bean

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	apoplastic; Lima bean
4,022,808	+		Psyr_3364	0.16	+1.8
4,022,808	+		Psyr_3364	0.16	-0.0
4,022,808	+		Psyr_3364	0.16	+1.1
4,022,809	-		Psyr_3364	0.16	+0.8
4,022,809	-		Psyr_3364	0.16	+0.6
4,022,809	-		Psyr_3364	0.16	+1.0
4,022,815	-		Psyr_3364	0.16	+1.0
4,022,815	-		Psyr_3364	0.16	-2.4
4,022,961	+		Psyr_3364	0.29	-0.2
4,022,961	+		Psyr_3364	0.29	-0.6
4,022,961	+		Psyr_3364	0.29	+1.0
4,022,961	+		Psyr_3364	0.29	+0.3
4,022,961	+		Psyr_3364	0.29	+0.8
4,022,961	+		Psyr_3364	0.29	-0.0
4,022,961	+		Psyr_3364	0.29	-0.3
4,022,961	+		Psyr_3364	0.29	+1.2
4,022,961	+		Psyr_3364	0.29	-0.4
4,022,961	+		Psyr_3364	0.29	-0.0
4,022,961	+		Psyr_3364	0.29	-2.2
4,022,961	+		Psyr_3364	0.29	+0.7
4,022,961	+		Psyr_3364	0.29	+0.1
4,022,961	+		Psyr_3364	0.29	+0.1
4,022,961	+		Psyr_3364	0.29	+2.6
4,022,962	-		Psyr_3364	0.29	-0.9
4,022,962	-		Psyr_3364	0.29	-0.2
4,022,962	-		Psyr_3364	0.29	-1.0
4,022,962	-		Psyr_3364	0.29	+0.3
4,022,962	-		Psyr_3364	0.29	-0.4
4,022,962	-		Psyr_3364	0.29	+0.2
4,022,962	-		Psyr_3364	0.29	+0.1
4,022,962	-		Psyr_3364	0.29	-0.4
4,022,962	-		Psyr_3364	0.29	+0.6
4,022,962	-		Psyr_3364	0.29	-1.0
4,022,962	-		Psyr_3364	0.29	+0.5
4,022,962	-		Psyr_3364	0.29	-0.3
4,022,962	-		Psyr_3364	0.29	-0.0
4,022,962	-		Psyr_3364	0.29	+0.3
4,022,962	-		Psyr_3364	0.29	-0.0
4,022,962	-		Psyr_3364	0.29	+1.0
4,022,962	-		Psyr_3364	0.29	+0.6
4,022,962	-		Psyr_3364	0.29	-0.8
4,022,963	+		Psyr_3364	0.29	-0.4
4,022,964	-		Psyr_3364	0.29	-0.0
4,022,964	-		Psyr_3364	0.29	-1.4
4,022,964	-		Psyr_3364	0.29	-1.4
4,023,087	+		Psyr_3364	0.40	+0.7
4,023,111	+		Psyr_3364	0.42	+1.8
4,023,111	+		Psyr_3364	0.42	+1.0
4,023,112	-		Psyr_3364	0.42	-0.2
4,023,135	+		Psyr_3364	0.44	-1.2
4,023,135	+		Psyr_3364	0.44	+0.2
4,023,136	-		Psyr_3364	0.44	+2.0
4,023,242	+		Psyr_3364	0.53	-2.2
4,023,249	+		Psyr_3364	0.54	+0.9
4,023,249	+		Psyr_3364	0.54	-0.6
4,023,249	+		Psyr_3364	0.54	+0.6
4,023,249	+		Psyr_3364	0.54	-0.0
4,023,249	+		Psyr_3364	0.54	-0.6
4,023,249	+		Psyr_3364	0.54	+1.8
4,023,249	+		Psyr_3364	0.54	-0.3
4,023,249	+		Psyr_3364	0.54	-1.0
4,023,249	+		Psyr_3364	0.54	+0.3
4,023,249	+		Psyr_3364	0.54	-1.0
4,023,249	+		Psyr_3364	0.54	-1.3
4,023,249	+		Psyr_3364	0.54	-2.3
4,023,249	+		Psyr_3364	0.54	-1.8
4,023,249	+		Psyr_3364	0.54	-1.0
4,023,249	+		Psyr_3364	0.54	-2.4
4,023,249	+		Psyr_3364	0.54	+0.5
4,023,250	-		Psyr_3364	0.54	-0.4
4,023,250	-		Psyr_3364	0.54	+1.3
4,023,250	-		Psyr_3364	0.54	-2.5
4,023,250	-		Psyr_3364	0.54	-0.0
4,023,250	-		Psyr_3364	0.54	-1.4
4,023,250	-		Psyr_3364	0.54	-0.6
4,023,250	-		Psyr_3364	0.54	-0.4
4,023,250	-		Psyr_3364	0.54	+0.1
4,023,250	-		Psyr_3364	0.54	-1.0
4,023,250	-		Psyr_3364	0.54	-1.4
4,023,250	-		Psyr_3364	0.54	-1.6
4,023,250	-		Psyr_3364	0.54	+1.1
4,023,250	-		Psyr_3364	0.54	-0.4
4,023,250	-		Psyr_3364	0.54	-1.6
4,023,250	-		Psyr_3364	0.54	-1.0
4,023,250	-		Psyr_3364	0.54	-0.4
4,023,250	-		Psyr_3364	0.54	-0.4
4,023,250	-		Psyr_3364	0.54	+0.2
4,023,251	+		Psyr_3364	0.54	-1.3
4,023,251	+		Psyr_3364	0.54	-1.0
4,023,251	+		Psyr_3364	0.54	-0.8
4,023,252	-		Psyr_3364	0.54	+1.0
4,023,252	-		Psyr_3364	0.54	+0.1
4,023,259	+		Psyr_3364	0.54	+0.2
4,023,260	-		Psyr_3364	0.55	+0.7
4,023,283	-		Psyr_3364	0.57	+0.9
4,023,383	-		Psyr_3364	0.65	+1.7
4,023,462	+		Psyr_3364	0.72	-2.5
4,023,507	+		Psyr_3364	0.76	-0.3
4,023,657	+		Psyr_3364	0.89	-0.8
4,023,658	-		Psyr_3364	0.89	+0.4
4,023,963	+		Psyr_3365	0.16	-1.3
4,023,963	+		Psyr_3365	0.16	+1.1
4,023,963	+		Psyr_3365	0.16	-0.3
4,023,964	-		Psyr_3365	0.16	-1.6
4,023,964	-		Psyr_3365	0.16	-0.6
4,023,983	+		Psyr_3365	0.18	+0.7
4,023,985	+		Psyr_3365	0.18	-0.8
4,023,985	+		Psyr_3365	0.18	+0.6
4,023,985	+		Psyr_3365	0.18	-1.3
4,023,986	-		Psyr_3365	0.18	+0.2
4,023,986	-		Psyr_3365	0.18	-1.8
4,023,986	-		Psyr_3365	0.18	-2.6
4,023,986	-		Psyr_3365	0.18	+0.6
4,023,986	-		Psyr_3365	0.18	+3.6
4,023,986	-		Psyr_3365	0.18	+0.1
4,023,986	-		Psyr_3365	0.18	-0.6
4,023,986	-		Psyr_3365	0.18	-0.4
4,023,986	-		Psyr_3365	0.18	+0.8
4,023,986	-		Psyr_3365	0.18	-1.1
4,024,226	+		Psyr_3365	0.39	+0.2
4,024,226	+		Psyr_3365	0.39	-0.6
4,024,390	+		Psyr_3365	0.53	-2.6
4,024,390	+		Psyr_3365	0.53	-2.0
4,024,390	+		Psyr_3365	0.53	+0.7
4,024,390	+		Psyr_3365	0.53	-0.5
4,024,391	-		Psyr_3365	0.53	+0.2
4,024,411	-		Psyr_3365	0.55	-3.5
4,024,411	-		Psyr_3365	0.55	-1.8
4,024,411	-		Psyr_3365	0.55	-0.1
4,024,462	+		Psyr_3365	0.60	-0.4
4,024,747	+		Psyr_3365	0.84	+2.0
4,024,747	+		Psyr_3365	0.84	+0.2
4,024,747	+		Psyr_3365	0.84	-0.0
4,024,747	+		Psyr_3365	0.84	-1.8
4,024,747	+		Psyr_3365	0.84	-0.0
4,024,747	+		Psyr_3365	0.84	-2.8
4,024,747	+		Psyr_3365	0.84	-2.6
4,024,748	-		Psyr_3365	0.84	-3.4
4,024,748	-		Psyr_3365	0.84	+0.1
4,024,748	-		Psyr_3365	0.84	-1.1
4,024,748	-		Psyr_3365	0.84	+1.6
4,024,748	-		Psyr_3365	0.84	+1.1
4,024,748	-		Psyr_3365	0.84	+0.2
4,024,748	-		Psyr_3365	0.84	-1.8
4,024,772	-		Psyr_3365	0.86	-2.1
4,025,003	-				+0.9
4,025,003	-				-1.8
4,025,003	-				-2.2
4,025,086	+		Psyr_3366	0.20	-1.6
4,025,086	+		Psyr_3366	0.20	-0.9
4,025,086	+		Psyr_3366	0.20	+0.2
4,025,086	+		Psyr_3366	0.20	+1.4
4,025,086	+		Psyr_3366	0.20	-0.6
4,025,086	+		Psyr_3366	0.20	+0.6
4,025,086	+		Psyr_3366	0.20	+0.5
4,025,086	+		Psyr_3366	0.20	+1.1
4,025,087	-		Psyr_3366	0.21	-0.6
4,025,087	-		Psyr_3366	0.21	-1.0
4,025,087	-		Psyr_3366	0.21	-2.4
4,025,087	-		Psyr_3366	0.21	-1.9
4,025,087	-		Psyr_3366	0.21	-1.8
4,025,087	-		Psyr_3366	0.21	-2.0
4,025,156	-		Psyr_3366	0.31	+1.0
4,025,156	-		Psyr_3366	0.31	+1.8
4,025,156	-		Psyr_3366	0.31	+1.0
4,025,156	-		Psyr_3366	0.31	+0.4
4,025,550	+				+1.4
4,025,649	+				+1.4
4,025,650	-				+1.7
4,025,650	-				+0.3
4,025,650	-				+1.0
4,025,798	-				+0.1
4,025,820	+				+0.5
4,025,821	-				+0.4
4,025,867	+				-0.1
4,025,867	+				+2.6
4,025,867	+				-1.0
4,025,868	-				+0.2
4,025,868	-				-0.0
4,025,868	-				+0.2
4,025,868	-				-2.7
4,025,868	-				+1.2
4,025,868	-				-0.1
4,025,868	-				+1.4
4,025,918	+				-0.4
4,025,918	+				+0.3
4,025,918	+				-0.8
4,025,918	+				-0.5
4,025,918	+				-0.9
4,025,919	-				+0.1