Strain Fitness in Pantoea sp. MT58 around IAI47_16760

Experiment: Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
3,546,624	+		IAI47_16755	0.41	-1.9
3,546,669	+		IAI47_16755	0.45	-1.4
3,546,690	+		IAI47_16755	0.47	-0.9
3,546,690	+		IAI47_16755	0.47	-0.1
3,546,691	-		IAI47_16755	0.48	+0.4
3,546,691	-		IAI47_16755	0.48	+0.2
3,546,691	-		IAI47_16755	0.48	-0.3
3,546,729	+		IAI47_16755	0.51	+0.1
3,546,812	-		IAI47_16755	0.59	+0.8
3,546,874	+		IAI47_16755	0.65	+0.1
3,546,874	+		IAI47_16755	0.65	+0.4
3,546,874	+		IAI47_16755	0.65	+1.2
3,546,874	+		IAI47_16755	0.65	-1.3
3,546,875	-		IAI47_16755	0.65	+0.1
3,546,875	-		IAI47_16755	0.65	+0.5
3,546,875	-		IAI47_16755	0.65	-3.2
3,546,875	-		IAI47_16755	0.65	-0.6
3,546,875	-		IAI47_16755	0.65	+0.1
3,546,875	-		IAI47_16755	0.65	+0.4
3,546,875	-		IAI47_16755	0.65	+0.2
3,546,883	+		IAI47_16755	0.66	-0.6
3,546,883	+		IAI47_16755	0.66	-1.6
3,546,883	+		IAI47_16755	0.66	+0.2
3,546,884	-		IAI47_16755	0.66	-1.6
3,546,924	+		IAI47_16755	0.70	+0.6
3,546,924	+		IAI47_16755	0.70	-0.8
3,546,924	+		IAI47_16755	0.70	-0.3
3,547,057	+		IAI47_16755	0.83	-0.1
3,547,057	-		IAI47_16755	0.83	+0.1
3,547,058	-		IAI47_16755	0.83	-0.5
3,547,058	-		IAI47_16755	0.83	+2.6
3,547,058	-		IAI47_16755	0.83	-1.4
3,547,058	-		IAI47_16755	0.83	+1.7
3,547,058	-		IAI47_16755	0.83	-0.7
3,547,058	-		IAI47_16755	0.83	-1.5
3,547,081	-		IAI47_16755	0.86	+1.5
3,547,081	-		IAI47_16755	0.86	-1.5
3,547,134	+				+0.1
3,547,134	+				-0.8
3,547,134	+				+2.5
3,547,134	+				+0.9
3,547,134	+				-0.4
3,547,134	+				+0.1
3,547,134	+				+2.8
3,547,134	+				+0.4
3,547,135	-				-0.3
3,547,135	-				-2.9
3,547,135	-				+2.3
3,547,135	-				-2.5
3,547,135	-				-1.4
3,547,135	-				-2.5
3,547,135	-				+0.1
3,547,135	-				+1.4
3,547,144	-				+0.6
3,547,226	-				+1.2
3,547,271	+				-0.4
3,547,271	+				-0.8
3,547,272	-				-2.2
3,547,272	-				-0.5
3,547,272	-				-0.3
3,547,299	+				+2.1
3,547,299	+				-0.2
3,547,299	+				+0.7
3,547,302	+				+0.3
3,547,303	-				-1.8
3,547,307	-				+2.1
3,547,316	+				+2.6
3,547,348	-				+0.2
3,547,353	+				+2.0
3,547,354	-				-0.1
3,547,354	-				+1.2
3,547,410	+				-2.2
3,547,410	+				-0.2
3,547,426	-				+1.1
3,547,426	-				-0.9
3,547,426	-				-1.0
3,547,433	+				+1.4
3,547,434	-				+3.8
3,547,467	+				+0.3
3,547,468	-				+3.4
3,547,488	+				-1.3
3,547,498	+				+0.5
3,547,498	+				+0.1
3,547,499	-				-1.2
3,547,522	+				+1.4
3,547,523	-				+1.1
3,547,560	+				+1.6
3,547,560	+				-2.6
3,547,598	+				+0.9
3,547,598	+				-0.1
3,547,599	-				+1.7
3,547,611	+				-1.4
3,547,611	+				+2.2
3,547,611	+				+2.4
3,547,611	+				+0.7
3,547,611	+				+2.1
3,547,611	+				+1.1
3,547,612	-				-1.3
3,547,612	-				-0.6
3,547,612	-				+2.2
3,547,612	-				+2.1
3,547,612	-				+0.3
3,547,612	-				+0.7
3,547,614	+				+0.6
3,547,614	+				-0.2
3,547,614	+				-0.1
3,547,614	+				+4.6
3,547,615	-				-2.0
3,547,615	-				-0.9
3,547,615	-				-0.3
3,547,615	-				+0.1
3,547,624	+				+2.1
3,547,624	+				-1.6
3,547,624	+				+0.9
3,547,634	+				-0.1
3,547,635	-				-1.0
3,547,669	-				-2.8
3,547,762	-		IAI47_16760	0.21	-0.8
3,547,770	+		IAI47_16760	0.22	-1.3
3,547,770	+		IAI47_16760	0.22	+1.0
3,547,771	-		IAI47_16760	0.22	+0.1
3,547,771	-		IAI47_16760	0.22	+2.2
3,547,837	+		IAI47_16760	0.31	-2.8
3,547,838	-		IAI47_16760	0.31	+1.2
3,547,888	-		IAI47_16760	0.38	+0.5
3,547,888	-		IAI47_16760	0.38	-0.5
3,548,100	+		IAI47_16760	0.67	+2.3
3,548,100	+		IAI47_16760	0.67	+1.1
3,548,101	-		IAI47_16760	0.67	+0.0
3,548,101	-		IAI47_16760	0.67	+1.4
3,548,135	+		IAI47_16760	0.71	+1.1
3,548,239	+		IAI47_16760	0.85	+0.2
3,548,239	+		IAI47_16760	0.85	-1.6
3,548,239	+		IAI47_16760	0.85	-0.4
3,548,239	+		IAI47_16760	0.85	+1.7
3,548,240	-		IAI47_16760	0.85	+1.8
3,548,240	-		IAI47_16760	0.85	-0.5
3,548,240	-		IAI47_16760	0.85	+0.1
3,548,240	-		IAI47_16760	0.85	+0.6
3,548,240	-		IAI47_16760	0.85	-2.1
3,548,240	-		IAI47_16760	0.85	-2.9
3,548,356	+				-0.0
3,548,356	+				+0.7
3,548,356	+				+0.4
3,548,356	+				-3.1
3,548,357	-				-2.2
3,548,368	+				+0.5
3,548,368	+				+0.2
3,548,368	+				-0.4
3,548,368	+				+0.6
3,548,369	-				-0.6
3,548,369	-				-2.2
3,548,369	-				-2.5
3,548,369	-				+0.1
3,548,369	-				-1.3
3,548,369	-				+0.2
3,548,371	+				+0.1
3,548,371	+				+2.1
3,548,372	-				+1.9
3,548,428	+				-1.8
3,548,428	+				+0.5
3,548,429	-				-1.2
3,548,442	+				-0.0
3,548,442	+				+0.0
3,548,443	-				+0.0
3,548,466	+				+2.2
3,548,466	+				-1.5
3,548,530	+		IAI47_16765	0.16	-0.4
3,548,530	+		IAI47_16765	0.16	+1.2
3,548,530	+		IAI47_16765	0.16	+0.7
3,548,530	+		IAI47_16765	0.16	-0.8
3,548,531	-		IAI47_16765	0.16	-1.1
3,548,531	-		IAI47_16765	0.16	+2.6
3,548,662	+		IAI47_16765	0.29	-1.3
3,548,662	+		IAI47_16765	0.29	+1.0
3,548,663	-		IAI47_16765	0.29	+1.6
3,548,663	-		IAI47_16765	0.29	+0.1
3,548,663	-		IAI47_16765	0.29	+0.9
3,548,728	+		IAI47_16765	0.36	+0.0
3,548,728	+		IAI47_16765	0.36	+0.2
3,548,729	-		IAI47_16765	0.36	+1.5
3,548,729	-		IAI47_16765	0.36	-2.5
3,548,744	-		IAI47_16765	0.37	+1.4
3,548,750	+		IAI47_16765	0.38	+1.3
3,548,750	+		IAI47_16765	0.38	+0.6
3,548,750	+		IAI47_16765	0.38	+0.7
3,548,750	+		IAI47_16765	0.38	-0.8
3,548,750	+		IAI47_16765	0.38	-3.1
3,548,750	+		IAI47_16765	0.38	-0.3
3,548,751	-		IAI47_16765	0.38	-1.0
3,548,751	-		IAI47_16765	0.38	-1.4
3,548,770	+		IAI47_16765	0.40	-0.1
3,548,770	+		IAI47_16765	0.40	+0.9
3,548,831	+		IAI47_16765	0.46	-0.1
3,548,831	+		IAI47_16765	0.46	-0.1
3,548,831	+		IAI47_16765	0.46	-2.1
3,548,832	-		IAI47_16765	0.46	-2.8
3,548,855	-		IAI47_16765	0.48	+1.0
3,548,870	-		IAI47_16765	0.50	+0.6
3,548,941	+		IAI47_16765	0.57	+2.2
3,548,942	-		IAI47_16765	0.57	+1.8
3,548,956	+		IAI47_16765	0.58	+1.1
3,548,956	+		IAI47_16765	0.58	+1.0
3,548,957	-		IAI47_16765	0.58	-1.0
3,548,957	-		IAI47_16765	0.58	-0.5
3,548,957	-		IAI47_16765	0.58	+0.3
3,548,972	+		IAI47_16765	0.60	-1.0
3,548,973	-		IAI47_16765	0.60	+0.9
3,548,973	-		IAI47_16765	0.60	-1.4
3,548,973	-		IAI47_16765	0.60	-1.5
3,548,973	-		IAI47_16765	0.60	+0.3
3,549,022	+		IAI47_16765	0.65	-0.1
3,549,022	+		IAI47_16765	0.65	-0.2
3,549,023	-		IAI47_16765	0.65	+3.5
3,549,023	-		IAI47_16765	0.65	-2.5
3,549,023	-		IAI47_16765	0.65	+1.6
3,549,023	-		IAI47_16765	0.65	+1.3
3,549,025	+		IAI47_16765	0.65	+1.9
3,549,050	+		IAI47_16765	0.68	-2.2
3,549,050	+		IAI47_16765	0.68	+1.5
3,549,051	-		IAI47_16765	0.68	-0.5
3,549,051	-		IAI47_16765	0.68	-0.2
3,549,051	-		IAI47_16765	0.68	+1.6
3,549,051	-		IAI47_16765	0.68	+0.3
3,549,064	+		IAI47_16765	0.69	+0.5
3,549,065	-		IAI47_16765	0.69	+0.2
3,549,122	-		IAI47_16765	0.75	-1.5
3,549,122	-		IAI47_16765	0.75	-0.9
3,549,122	-		IAI47_16765	0.75	+0.6
3,549,122	-		IAI47_16765	0.75	+0.7
3,549,175	+		IAI47_16765	0.80	+1.7
3,549,175	+		IAI47_16765	0.80	+0.8
3,549,175	+		IAI47_16765	0.80	-0.5
3,549,219	+		IAI47_16765	0.85	+0.2
3,549,268	+		IAI47_16765	0.89	-1.1
3,549,268	+		IAI47_16765	0.89	-0.6
3,549,268	+		IAI47_16765	0.89	+3.0
3,549,268	+		IAI47_16765	0.89	+0.2
3,549,268	+		IAI47_16765	0.89	-0.9
3,549,268	+		IAI47_16765	0.89	+0.9
3,549,269	-		IAI47_16765	0.90	-2.3
3,549,269	-		IAI47_16765	0.90	+0.3
3,549,269	-		IAI47_16765	0.90	+0.0
3,549,281	+				+2.5
3,549,282	-				+0.0
3,549,301	+				-1.9
3,549,302	-				-0.1