Strain Fitness in Pantoea sp. MT58 around IAI47_15395

Experiment: Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
3,241,566	+		IAI47_15385	0.70	+0.6
3,241,567	-		IAI47_15385	0.70	-1.1
3,241,567	-		IAI47_15385	0.70	-0.2
3,241,567	-		IAI47_15385	0.70	-0.3
3,241,603	+		IAI47_15385	0.73	-0.8
3,241,603	+		IAI47_15385	0.73	+0.2
3,241,603	+		IAI47_15385	0.73	+0.6
3,241,604	-		IAI47_15385	0.73	-2.0
3,241,604	-		IAI47_15385	0.73	+0.3
3,241,639	-		IAI47_15385	0.77	+0.2
3,241,671	+		IAI47_15385	0.80	+0.5
3,241,714	+		IAI47_15385	0.84	+0.8
3,241,714	+		IAI47_15385	0.84	+0.5
3,241,715	-		IAI47_15385	0.84	+1.1
3,241,715	-		IAI47_15385	0.84	-1.7
3,241,715	-		IAI47_15385	0.84	-0.7
3,241,725	+		IAI47_15385	0.85	+1.2
3,241,726	-		IAI47_15385	0.85	+0.5
3,241,726	-		IAI47_15385	0.85	+0.0
3,241,734	+		IAI47_15385	0.86	-0.5
3,241,734	+		IAI47_15385	0.86	+0.9
3,241,734	+		IAI47_15385	0.86	+0.8
3,241,735	-		IAI47_15385	0.86	+1.0
3,241,735	-		IAI47_15385	0.86	+0.5
3,241,735	-		IAI47_15385	0.86	-1.7
3,241,735	-		IAI47_15385	0.86	+0.6
3,241,753	+		IAI47_15385	0.88	+1.3
3,241,754	-		IAI47_15385	0.88	-1.9
3,241,779	+				+1.3
3,241,779	+				+0.8
3,241,779	+				+0.3
3,241,779	+				+0.5
3,241,779	+				-0.2
3,241,779	+				-1.5
3,241,779	+				+0.0
3,241,780	-				-2.5
3,241,780	-				+0.6
3,241,780	-				-1.1
3,241,780	-				-2.0
3,241,856	+				+0.5
3,241,857	-				-1.2
3,241,865	+				-0.4
3,241,865	+				-0.3
3,241,865	+				+1.4
3,241,865	+				-0.8
3,241,865	+				-0.2
3,241,865	+				+1.5
3,241,865	+				-1.7
3,241,865	+				-0.4
3,241,865	+				-1.3
3,241,865	+				+1.5
3,241,865	+				-1.1
3,241,865	+				-0.3
3,241,865	+				+2.0
3,241,865	+				+1.7
3,241,865	+				+1.3
3,241,865	+				-2.2
3,241,866	-				-1.8
3,241,866	-				+0.5
3,241,866	-				+1.0
3,241,866	-				-1.5
3,241,866	-				+3.3
3,241,866	-				+0.7
3,241,866	-				+1.5
3,241,866	-				-2.5
3,241,870	+				-1.3
3,241,870	+				-1.0
3,241,870	+				+0.3
3,241,870	+				+0.6
3,241,870	+				-0.3
3,241,870	+				+3.2
3,241,870	+				-2.0
3,241,871	-				-2.9
3,241,871	-				+0.0
3,241,871	-				-2.3
3,241,871	-				+1.6
3,241,871	-				-1.1
3,241,985	+		IAI47_15390	0.17	+3.3
3,241,985	+		IAI47_15390	0.17	+0.3
3,241,985	+		IAI47_15390	0.17	+0.8
3,241,985	+		IAI47_15390	0.17	-0.5
3,241,985	+		IAI47_15390	0.17	-0.1
3,241,985	+		IAI47_15390	0.17	-0.2
3,241,986	-		IAI47_15390	0.18	+0.9
3,241,986	-		IAI47_15390	0.18	-3.0
3,241,986	-		IAI47_15390	0.18	-1.3
3,241,986	-		IAI47_15390	0.18	+0.0
3,241,986	-		IAI47_15390	0.18	+0.5
3,241,986	-		IAI47_15390	0.18	-2.1
3,241,986	-		IAI47_15390	0.18	+0.5
3,241,986	-		IAI47_15390	0.18	+0.0
3,241,986	-		IAI47_15390	0.18	+0.2
3,241,986	-		IAI47_15390	0.18	-1.4
3,242,048	+		IAI47_15390	0.27	-1.4
3,242,049	+		IAI47_15390	0.27	-0.6
3,242,049	+		IAI47_15390	0.27	+1.6
3,242,050	-		IAI47_15390	0.27	+1.0
3,242,053	+		IAI47_15390	0.28	-1.4
3,242,053	+		IAI47_15390	0.28	+0.6
3,242,054	-		IAI47_15390	0.28	-1.1
3,242,077	+		IAI47_15390	0.31	-3.1
3,242,078	-		IAI47_15390	0.32	+1.2
3,242,105	-		IAI47_15390	0.36	+1.5
3,242,147	-		IAI47_15390	0.42	-1.1
3,242,179	+		IAI47_15390	0.47	+0.1
3,242,188	+		IAI47_15390	0.48	+0.5
3,242,189	-		IAI47_15390	0.49	-1.7
3,242,275	+		IAI47_15390	0.62	+0.5
3,242,275	+		IAI47_15390	0.62	+0.8
3,242,335	+		IAI47_15390	0.71	-1.5
3,242,335	+		IAI47_15390	0.71	-1.3
3,242,335	+		IAI47_15390	0.71	+1.5
3,242,335	+		IAI47_15390	0.71	+2.6
3,242,335	+		IAI47_15390	0.71	+0.4
3,242,336	-		IAI47_15390	0.71	+0.5
3,242,336	-		IAI47_15390	0.71	+0.9
3,242,405	+		IAI47_15390	0.82	+1.6
3,242,405	+		IAI47_15390	0.82	+0.7
3,242,405	+		IAI47_15390	0.82	-2.2
3,242,405	+		IAI47_15390	0.82	+1.4
3,242,406	-		IAI47_15390	0.82	+0.0
3,242,406	-		IAI47_15390	0.82	+0.5
3,242,406	-		IAI47_15390	0.82	+2.5
3,242,406	-		IAI47_15390	0.82	+0.4
3,242,406	-		IAI47_15390	0.82	-0.3
3,242,411	+		IAI47_15390	0.83	-1.3
3,242,411	+		IAI47_15390	0.83	+0.8
3,242,411	+		IAI47_15390	0.83	-0.3
3,242,411	+		IAI47_15390	0.83	+3.2
3,242,411	+		IAI47_15390	0.83	-1.5
3,242,411	+		IAI47_15390	0.83	-2.0
3,242,412	-		IAI47_15390	0.83	-0.1
3,242,412	-		IAI47_15390	0.83	+0.3
3,242,412	-		IAI47_15390	0.83	+2.8
3,242,412	-		IAI47_15390	0.83	+0.2
3,242,412	-		IAI47_15390	0.83	+0.8
3,242,412	-		IAI47_15390	0.83	+0.2
3,242,412	-		IAI47_15390	0.83	-0.3
3,242,412	-		IAI47_15390	0.83	-0.5
3,242,412	-		IAI47_15390	0.83	+0.8
3,242,412	-		IAI47_15390	0.83	-2.7
3,242,412	-		IAI47_15390	0.83	-1.5
3,242,412	-		IAI47_15390	0.83	+1.5
3,242,412	-		IAI47_15390	0.83	+2.0
3,242,413	+		IAI47_15390	0.83	+0.5
3,242,414	-		IAI47_15390	0.83	+1.4
3,242,414	-		IAI47_15390	0.83	-0.6
3,242,421	-		IAI47_15390	0.84	+0.6
3,242,421	-		IAI47_15390	0.84	-1.0
3,242,421	-		IAI47_15390	0.84	-1.5
3,242,422	+		IAI47_15390	0.84	-1.3
3,242,422	+		IAI47_15390	0.84	+0.9
3,242,422	+		IAI47_15390	0.84	-1.9
3,242,422	+		IAI47_15390	0.84	+1.2
3,242,422	+		IAI47_15390	0.84	+1.5
3,242,423	-		IAI47_15390	0.84	-2.5
3,242,423	-		IAI47_15390	0.84	+0.5
3,242,423	-		IAI47_15390	0.84	-1.3
3,242,423	-		IAI47_15390	0.84	+1.2
3,242,423	-		IAI47_15390	0.84	+0.5
3,242,423	-		IAI47_15390	0.84	-2.8
3,242,423	-		IAI47_15390	0.84	-1.0
3,242,440	+		IAI47_15390	0.87	+0.5
3,242,440	+		IAI47_15390	0.87	-1.0
3,242,441	-		IAI47_15390	0.87	+0.5
3,242,441	-		IAI47_15390	0.87	-2.6
3,242,445	+		IAI47_15390	0.88	+2.0
3,242,445	+		IAI47_15390	0.88	+0.8
3,242,445	+		IAI47_15390	0.88	-2.4
3,242,445	+		IAI47_15390	0.88	+0.1
3,242,445	+		IAI47_15390	0.88	+2.3
3,242,445	+		IAI47_15390	0.88	+1.6
3,242,446	-		IAI47_15390	0.88	-0.4
3,242,446	-		IAI47_15390	0.88	-0.9
3,242,446	-		IAI47_15390	0.88	+2.5
3,242,446	-		IAI47_15390	0.88	+1.8
3,242,448	+		IAI47_15390	0.88	-1.9
3,242,448	+		IAI47_15390	0.88	-2.0
3,242,448	+		IAI47_15390	0.88	-1.1
3,242,448	+		IAI47_15390	0.88	+0.6
3,242,448	+		IAI47_15390	0.88	+1.0
3,242,449	-		IAI47_15390	0.88	+0.7
3,242,449	-		IAI47_15390	0.88	+0.3
3,242,449	-		IAI47_15390	0.88	-1.0
3,242,449	-		IAI47_15390	0.88	-0.7
3,242,458	-		IAI47_15390	0.90	-1.1
3,242,466	+				+0.6
3,242,466	+				-0.8
3,242,466	+				+0.7
3,242,467	-				+0.8
3,242,467	-				-0.5
3,242,467	-				-1.0
3,242,471	+				+0.8
3,242,471	+				+0.0
3,242,471	+				+1.6
3,242,471	+				-1.7
3,242,472	-				+1.6
3,242,472	-				+0.9
3,242,472	-				-1.0
3,242,472	-				-2.1
3,242,518	+				-0.5
3,242,522	+				+1.0
3,242,522	+				+0.2
3,242,522	+				-1.3
3,242,522	+				-0.8
3,242,522	+				+0.6
3,242,522	+				+1.4
3,242,522	+				-1.1
3,242,522	+				-0.3
3,242,522	+				+2.5
3,242,522	+				-2.7
3,242,522	+				-1.1
3,242,522	+				+0.8
3,242,522	+				-1.1
3,242,522	+				-3.0
3,242,522	+				-0.3
3,242,522	+				+2.0
3,242,523	-				-0.5
3,242,523	-				+2.2
3,242,523	-				+0.3
3,242,523	-				+0.8
3,242,523	-				-2.7
3,242,523	-				+0.1
3,242,523	-				+0.5
3,242,523	-				+0.4
3,242,523	-				-0.1
3,242,524	-				+1.4
3,242,528	+				-1.4
3,242,529	+				+0.1
3,242,529	+				+0.5
3,242,529	+				-0.6
3,242,529	+				+2.3
3,242,530	-				-1.0
3,242,537	+				-0.6
3,242,537	+				-2.9
3,242,538	-				+2.0
3,242,538	-				-0.8
3,242,538	-				-1.0
3,242,538	-				-1.9
3,242,540	+				-1.7
3,242,540	+				-3.6
3,242,540	+				+1.8
3,242,541	-				+0.3
3,242,554	+				-1.3
3,242,554	+				+1.0
3,242,554	+				+3.4
3,242,554	+				-2.5
3,242,554	+				+1.2
3,242,554	+				-1.7
3,242,555	-				-0.6
3,242,555	-				-1.9
3,242,645	-		IAI47_15395	0.11	+1.0
3,242,645	-		IAI47_15395	0.11	+0.5
3,242,719	+		IAI47_15395	0.20	+1.0
3,242,719	+		IAI47_15395	0.20	-1.3
3,242,719	+				+1.0
3,242,719	+		IAI47_15395	0.20	+1.0
3,242,719	+		IAI47_15395	0.20	-1.3
3,242,719	+		IAI47_15395	0.20	+0.5
3,242,719	+		IAI47_15395	0.20	+1.0
3,242,719	+		IAI47_15395	0.20	-3.5
3,242,719	+		IAI47_15395	0.20	-1.7
3,242,719	+		IAI47_15395	0.20	-1.3
3,242,719	+		IAI47_15395	0.20	+0.0
3,242,720	-		IAI47_15395	0.20	-1.9
3,242,720	-		IAI47_15395	0.20	-1.5
3,242,720	-		IAI47_15395	0.20	-1.1
3,242,720	-		IAI47_15395	0.20	-1.0
3,242,720	-		IAI47_15395	0.20	+1.5
3,242,720	-		IAI47_15395	0.20	+0.4
3,242,720	-		IAI47_15395	0.20	-2.4
3,242,720	-		IAI47_15395	0.20	-1.5
3,242,720	-		IAI47_15395	0.20	-0.8
3,242,723	+		IAI47_15395	0.21	-2.0
3,242,723	+		IAI47_15395	0.21	+0.3
3,242,723	+		IAI47_15395	0.21	-3.2
3,242,723	+		IAI47_15395	0.21	+0.2
3,242,723	+		IAI47_15395	0.21	-0.7
3,242,724	-		IAI47_15395	0.21	+2.8
3,242,724	-		IAI47_15395	0.21	+0.0
3,242,724	-		IAI47_15395	0.21	+1.6
3,242,724	-		IAI47_15395	0.21	-1.7
3,242,724	-		IAI47_15395	0.21	+1.7
3,242,724	-		IAI47_15395	0.21	-2.7
3,242,724	-		IAI47_15395	0.21	-1.4
3,242,724	-		IAI47_15395	0.21	+0.0
3,242,724	-		IAI47_15395	0.21	+0.2
3,242,759	+		IAI47_15395	0.25	-0.3
3,242,759	+		IAI47_15395	0.25	-0.1
3,242,760	-		IAI47_15395	0.25	-1.1
3,242,760	-		IAI47_15395	0.25	-2.0
3,242,760	-		IAI47_15395	0.25	-2.2
3,242,760	-		IAI47_15395	0.25	-0.9
3,242,825	+		IAI47_15395	0.33	+0.9
3,242,825	+		IAI47_15395	0.33	-0.9
3,242,825	+		IAI47_15395	0.33	+0.1
3,242,826	-		IAI47_15395	0.33	-0.5
3,242,855	+		IAI47_15395	0.37	-2.9
3,242,855	+		IAI47_15395	0.37	-1.2
3,242,889	-		IAI47_15395	0.41	-1.0
3,242,986	+		IAI47_15395	0.53	+0.2
3,243,076	+		IAI47_15395	0.64	-2.4
3,243,076	+		IAI47_15395	0.64	-0.1
3,243,077	-		IAI47_15395	0.64	-1.7
3,243,167	+		IAI47_15395	0.75	+0.9
3,243,167	+		IAI47_15395	0.75	-0.6
3,243,167	+		IAI47_15395	0.75	-0.9
3,243,168	-		IAI47_15395	0.75	-1.8
3,243,233	+		IAI47_15395	0.83	+0.7
3,243,233	+		IAI47_15395	0.83	-0.7
3,243,233	+		IAI47_15395	0.83	-1.5
3,243,233	+		IAI47_15395	0.83	-1.4
3,243,233	+		IAI47_15395	0.83	+1.0
3,243,233	+		IAI47_15395	0.83	-0.3
3,243,233	+		IAI47_15395	0.83	+2.6
3,243,233	+		IAI47_15395	0.83	+1.6
3,243,233	+		IAI47_15395	0.83	-0.3
3,243,234	-		IAI47_15395	0.83	-2.4
3,243,234	-		IAI47_15395	0.83	+1.2
3,243,234	-		IAI47_15395	0.83	-1.4
3,243,234	-		IAI47_15395	0.83	+0.5
3,243,234	-		IAI47_15395	0.83	-0.3
3,243,234	-		IAI47_15395	0.83	-2.2
3,243,234	-		IAI47_15395	0.83	+0.8
3,243,234	-		IAI47_15395	0.83	-0.5
3,243,262	+		IAI47_15395	0.87	-1.1
3,243,262	+		IAI47_15395	0.87	+2.3
3,243,262	+		IAI47_15395	0.87	+0.3
3,243,263	-		IAI47_15395	0.87	+0.0
3,243,263	-		IAI47_15395	0.87	-1.0
3,243,265	+		IAI47_15395	0.87	-1.8
3,243,265	+		IAI47_15395	0.87	+0.6
3,243,265	+		IAI47_15395	0.87	-0.2
3,243,265	+		IAI47_15395	0.87	-1.2
3,243,266	-		IAI47_15395	0.87	-0.8
3,243,266	-		IAI47_15395	0.87	+0.9
3,243,266	-		IAI47_15395	0.87	-0.2
3,243,302	+				-0.5
3,243,303	-				-2.1
3,243,320	-				+1.6
3,243,331	+				+3.5
3,243,331	+				-2.0
3,243,332	-				+0.6
3,243,332	-				+0.7
3,243,332	-				+1.5
3,243,334	+				-1.1
3,243,334	+				+0.9
3,243,335	-				-0.5
3,243,335	-				-3.8
3,243,368	+				-0.1
3,243,390	-				-0.2
3,243,402	-				+0.1
3,243,418	+				+0.2
3,243,418	+				-1.3
3,243,419	-				-0.9
3,243,419	-				+0.7
3,243,442	+				+0.1
3,243,442	+				+0.1
3,243,443	-				-2.7
3,243,443	-				-1.0
3,243,443	-				-1.1
3,243,446	+				-2.6
3,243,446	+				+0.5
3,243,446	+				-0.5
3,243,446	+				-1.3
3,243,447	-				+1.8
3,243,447	-				-0.4
3,243,447	-				-2.0
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3,243,525	-				-0.4
3,243,525	-				+0.5
3,243,525	-				+0.0
3,243,556	+		IAI47_15400	0.14	+3.0
3,243,556	+		IAI47_15400	0.14	-1.3
3,243,556	+		IAI47_15400	0.14	+0.1
3,243,556	+		IAI47_15400	0.14	-1.4
3,243,557	-		IAI47_15400	0.15	-0.4
3,243,612	+		IAI47_15400	0.28	-2.4
3,243,612	+		IAI47_15400	0.28	+0.9
3,243,613	-		IAI47_15400	0.29	-0.8
3,243,613	-		IAI47_15400	0.29	-1.9
3,243,646	+		IAI47_15400	0.37	-1.9
3,243,646	+		IAI47_15400	0.37	+1.0
3,243,646	+		IAI47_15400	0.37	-1.8
3,243,647	-		IAI47_15400	0.37	-0.9
3,243,647	-		IAI47_15400	0.37	-1.5
3,243,648	+		IAI47_15400	0.37	+0.6
3,243,649	-		IAI47_15400	0.38	-2.2
3,243,649	-		IAI47_15400	0.38	+1.3
3,243,672	+		IAI47_15400	0.43	-0.5
3,243,672	+		IAI47_15400	0.43	-1.9
3,243,750	+		IAI47_15400	0.63	-0.8
3,243,751	-		IAI47_15400	0.63	+0.3
3,243,848	-		IAI47_15400	0.87	+0.2
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3,244,017	+		IAI47_15405	0.17	-0.3
3,244,017	+		IAI47_15405	0.17	+0.8
3,244,017	+		IAI47_15405	0.17	-0.8
3,244,017	+		IAI47_15405	0.17	-0.9
3,244,017	+		IAI47_15405	0.17	+2.2
3,244,017	+		IAI47_15405	0.17	+0.3
3,244,018	-		IAI47_15405	0.18	-0.4
3,244,018	-		IAI47_15405	0.18	-0.9
3,244,018	-		IAI47_15405	0.18	+0.4
3,244,018	-		IAI47_15405	0.18	+1.5
3,244,018	-		IAI47_15405	0.18	-0.7
3,244,018	-		IAI47_15405	0.18	-1.3
3,244,295	+		IAI47_15405	0.57	-2.0
3,244,305	+		IAI47_15405	0.58	-3.0
3,244,305	+		IAI47_15405	0.58	+0.2
3,244,305	+		IAI47_15405	0.58	+2.0
3,244,305	+		IAI47_15405	0.58	+0.7
3,244,306	-		IAI47_15405	0.58	-1.5
3,244,306	-		IAI47_15405	0.58	-1.9
3,244,306	-		IAI47_15405	0.58	-2.5
3,244,306	-		IAI47_15405	0.58	+1.6
3,244,306	-		IAI47_15405	0.58	+0.3