Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20260

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
4,246,054	+		BWI76_RS20255	0.31	+2.0
4,246,185	+		BWI76_RS20255	0.41	-0.4
4,246,187	+		BWI76_RS20255	0.41	-0.5
4,246,239	-		BWI76_RS20255	0.44	-0.1
4,246,405	-		BWI76_RS20255	0.56	+0.3
4,246,438	+		BWI76_RS20255	0.59	-1.2
4,246,442	-		BWI76_RS20255	0.59	-0.4
4,246,454	-		BWI76_RS20255	0.60	+0.2
4,246,494	+		BWI76_RS20255	0.63	-0.3
4,246,502	-		BWI76_RS20255	0.63	+0.7
4,246,594	+		BWI76_RS20255	0.70	+1.0
4,246,598	-				+1.7
4,246,621	-		BWI76_RS20255	0.72	-0.5
4,246,626	-		BWI76_RS20255	0.72	-0.6
4,246,660	-		BWI76_RS20255	0.75	+0.8
4,246,660	-		BWI76_RS20255	0.75	+0.1
4,246,667	-		BWI76_RS20255	0.75	+1.2
4,246,668	-		BWI76_RS20255	0.75	-0.9
4,246,736	-		BWI76_RS20255	0.80	+0.2
4,246,829	+		BWI76_RS20255	0.87	+0.0
4,246,829	+		BWI76_RS20255	0.87	-0.4
4,246,829	+		BWI76_RS20255	0.87	-0.0
4,246,829	+		BWI76_RS20255	0.87	+0.1
4,246,829	+		BWI76_RS20255	0.87	+0.6
4,246,829	+		BWI76_RS20255	0.87	-1.7
4,246,829	+		BWI76_RS20255	0.87	+0.8
4,246,829	+		BWI76_RS20255	0.87	+0.3
4,246,830	+		BWI76_RS20255	0.87	+2.5
4,246,837	-		BWI76_RS20255	0.87	-0.1
4,246,837	-		BWI76_RS20255	0.87	+0.1
4,246,837	-		BWI76_RS20255	0.87	-0.3
4,246,837	-		BWI76_RS20255	0.87	+0.4
4,246,837	-		BWI76_RS20255	0.87	+0.1
4,246,837	-		BWI76_RS20255	0.87	-0.7
4,246,837	-		BWI76_RS20255	0.87	+0.4
4,246,837	-		BWI76_RS20255	0.87	-0.2
4,246,837	-		BWI76_RS20255	0.87	+1.2
4,246,837	-				-0.3
4,246,858	-		BWI76_RS20255	0.89	+0.2
4,246,887	+				-0.3
4,246,887	+				-1.7
4,246,896	+				+0.8
4,246,897	-				-0.1
4,246,905	-				+0.2
4,246,949	+				+0.8
4,246,954	+				+0.3
4,246,954	+				+0.2
4,246,962	-				+0.9
4,246,962	-				+1.7
4,246,965	+				+1.5
4,247,002	+				+1.0
4,247,009	-				+2.3
4,247,010	-				-0.3
4,247,017	-				-0.3
4,247,017	-				-0.8
4,247,047	-				-0.0
4,247,058	+				+3.3
4,247,061	-		BWI76_RS20260	0.11	+1.1
4,247,064	-		BWI76_RS20260	0.12	+0.6
4,247,064	-		BWI76_RS20260	0.12	+0.2
4,247,064	-		BWI76_RS20260	0.12	+0.3
4,247,175	+		BWI76_RS20260	0.52	+0.7
4,247,180	+		BWI76_RS20260	0.54	+0.7
4,247,180	+		BWI76_RS20260	0.54	+1.3
4,247,188	-		BWI76_RS20260	0.57	-0.6
4,247,188	-		BWI76_RS20260	0.57	+0.8
4,247,188	-		BWI76_RS20260	0.57	-0.0
4,247,188	-		BWI76_RS20260	0.57	+0.5
4,247,188	-		BWI76_RS20260	0.57	+0.3
4,247,188	-		BWI76_RS20260	0.57	-0.4
4,247,188	-		BWI76_RS20260	0.57	-0.2
4,247,188	-		BWI76_RS20260	0.57	-1.7
4,247,190	+		BWI76_RS20260	0.58	-0.7
4,247,190	+				+0.1
4,247,195	+				+0.1
4,247,195	+		BWI76_RS20260	0.60	-0.3
4,247,197	+		BWI76_RS20260	0.60	-1.0
4,247,197	+		BWI76_RS20260	0.60	+0.2
4,247,197	-		BWI76_RS20260	0.60	+0.5
4,247,198	-		BWI76_RS20260	0.61	-1.7
4,247,198	-		BWI76_RS20260	0.61	+0.3
4,247,198	-		BWI76_RS20260	0.61	+0.3
4,247,198	-		BWI76_RS20260	0.61	-0.4
4,247,198	-		BWI76_RS20260	0.61	-0.3
4,247,198	-		BWI76_RS20260	0.61	+0.3
4,247,199	+		BWI76_RS20260	0.61	-0.0
4,247,200	+		BWI76_RS20260	0.62	-0.1
4,247,200	+		BWI76_RS20260	0.62	-2.8
4,247,207	-		BWI76_RS20260	0.64	+0.9
4,247,207	-				-0.9
4,247,207	-		BWI76_RS20260	0.64	-0.0
4,247,208	-		BWI76_RS20260	0.64	-2.4
4,247,208	-		BWI76_RS20260	0.64	-0.3
4,247,208	-		BWI76_RS20260	0.64	-0.4
4,247,208	-		BWI76_RS20260	0.64	-0.0
4,247,212	-		BWI76_RS20260	0.66	-1.1
4,247,213	-		BWI76_RS20260	0.66	+0.5
4,247,269	+		BWI76_RS20260	0.87	+0.6
4,247,269	+		BWI76_RS20260	0.87	+1.4
4,247,272	-		BWI76_RS20260	0.88	+0.2
4,247,274	+		BWI76_RS20260	0.89	+1.2
4,247,274	+		BWI76_RS20260	0.89	-1.1
4,247,277	-				-0.1
4,247,277	-				+0.7
4,247,277	-				-0.2
4,247,279	+				-0.5
4,247,282	-				-0.0
4,247,282	-				+0.3
4,247,282	-				-0.3
4,247,282	-				+0.3
4,247,282	-				+0.4
4,247,282	-				-1.1
4,247,282	-				-1.1
4,247,282	-				+0.8
4,247,282	-				-0.1
4,247,282	-				-0.7
4,247,282	-				+0.4
4,247,316	+				-1.5
4,247,326	+				-0.7
4,247,326	+				-0.7
4,247,326	+				-0.4
4,247,326	+				-0.2
4,247,326	+				-1.3
4,247,326	+				-1.9
4,247,326	+				-2.3
4,247,326	+				+0.3
4,247,334	-				+0.6
4,247,334	-				+1.7
4,247,334	-				+1.7
4,247,334	-				-0.9
4,247,344	-				+0.0
4,247,345	-				-1.4
4,247,347	-				-0.7
4,247,347	-				-0.2
4,247,354	-				-0.5
4,247,354	-				-1.3
4,247,421	-				-0.1
4,247,421	-				+0.3
4,247,427	-				+0.1
4,247,491	-		BWI76_RS20265	0.24	+1.2
4,247,543	+		BWI76_RS20265	0.36	-0.3
4,247,557	+		BWI76_RS20265	0.39	+0.8
4,247,579	-		BWI76_RS20265	0.44	+0.4
4,247,580	+		BWI76_RS20265	0.44	-0.7
4,247,580	+		BWI76_RS20265	0.44	-0.4
4,247,583	-		BWI76_RS20265	0.45	+0.7
4,247,596	+		BWI76_RS20265	0.48	+1.2
4,247,596	+		BWI76_RS20265	0.48	-2.0
4,247,596	+		BWI76_RS20265	0.48	+1.9
4,247,596	+		BWI76_RS20265	0.48	-0.3
4,247,596	+		BWI76_RS20265	0.48	+0.7
4,247,596	+		BWI76_RS20265	0.48	+1.3
4,247,596	+		BWI76_RS20265	0.48	+0.9
4,247,596	+		BWI76_RS20265	0.48	+1.7
4,247,597	+		BWI76_RS20265	0.48	-0.5
4,247,597	+		BWI76_RS20265	0.48	+0.8
4,247,604	-				-0.3
4,247,604	-		BWI76_RS20265	0.50	-0.7
4,247,604	-		BWI76_RS20265	0.50	-1.0
4,247,604	-		BWI76_RS20265	0.50	-0.7
4,247,604	-		BWI76_RS20265	0.50	-0.6
4,247,604	-		BWI76_RS20265	0.50	+0.6
4,247,604	-		BWI76_RS20265	0.50	+1.2
4,247,604	-		BWI76_RS20265	0.50	-0.7
4,247,605	-		BWI76_RS20265	0.50	+1.2
4,247,605	-		BWI76_RS20265	0.50	-0.2
4,247,613	+		BWI76_RS20265	0.52	-1.7
4,247,639	+		BWI76_RS20265	0.57	-0.1
4,247,656	+		BWI76_RS20265	0.61	+0.7
4,247,664	-		BWI76_RS20265	0.63	-0.5
4,247,675	+				+0.1
4,247,683	-		BWI76_RS20265	0.67	+1.2
4,247,683	-		BWI76_RS20265	0.67	-0.3