Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10340

Experiment: 1-ethyl-3-methylimidazolium acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 20 mM
2,331,163	+		AO356_10330	0.89	+0.9
2,331,163	+		AO356_10330	0.89	+0.1
2,331,164	-		AO356_10330	0.89	+0.1
2,331,164	-		AO356_10330	0.89	-0.1
2,331,164	-		AO356_10330	0.89	+0.4
2,331,284	+				-0.1
2,331,312	-				+0.7
2,331,338	-				-0.6
2,331,482	+				+0.5
2,331,482	+				+0.3
2,331,482	+				-0.3
2,331,482	+				-0.1
2,331,482	+				+0.2
2,331,482	+				+0.5
2,331,482	+				+0.7
2,331,483	-				-0.2
2,331,483	-				-0.8
2,331,502	-				+0.3
2,331,502	-				+1.1
2,331,649	+		AO356_10335	0.31	+0.8
2,331,649	+		AO356_10335	0.31	+0.9
2,331,649	+		AO356_10335	0.31	+1.3
2,331,650	-		AO356_10335	0.31	-0.3
2,331,650	-		AO356_10335	0.31	+1.0
2,331,650	-		AO356_10335	0.31	-2.6
2,331,783	+		AO356_10335	0.62	-1.0
2,331,783	+		AO356_10335	0.62	-0.0
2,331,783	+		AO356_10335	0.62	+0.6
2,331,783	+		AO356_10335	0.62	-0.7
2,331,784	-		AO356_10335	0.62	+1.2
2,331,784	-		AO356_10335	0.62	+0.8
2,331,784	-		AO356_10335	0.62	-0.7
2,331,820	+		AO356_10335	0.71	-2.1
2,331,820	+		AO356_10335	0.71	+0.7
2,331,942	+				-1.4
2,331,942	+				-0.2
2,332,178	+		AO356_10340	0.19	-0.8
2,332,178	+		AO356_10340	0.19	-1.8
2,332,178	+		AO356_10340	0.19	-1.0
2,332,178	+		AO356_10340	0.19	-1.5
2,332,178	+		AO356_10340	0.19	+0.0
2,332,178	+		AO356_10340	0.19	-1.5
2,332,178	+		AO356_10340	0.19	+0.4
2,332,179	-		AO356_10340	0.19	-2.2
2,332,184	+		AO356_10340	0.20	-2.3
2,332,184	+		AO356_10340	0.20	-0.8
2,332,184	+		AO356_10340	0.20	-1.0
2,332,184	+		AO356_10340	0.20	-0.5
2,332,184	+		AO356_10340	0.20	-0.4
2,332,184	+		AO356_10340	0.20	-2.9
2,332,184	+		AO356_10340	0.20	-2.6
2,332,184	+		AO356_10340	0.20	-1.3
2,332,185	-		AO356_10340	0.20	+0.4
2,332,185	-		AO356_10340	0.20	-0.3
2,332,185	-		AO356_10340	0.20	-1.5
2,332,185	-		AO356_10340	0.20	-2.7
2,332,185	-		AO356_10340	0.20	-2.2
2,332,185	-		AO356_10340	0.20	-1.0
2,332,185	-		AO356_10340	0.20	-0.1
2,332,185	-		AO356_10340	0.20	-0.9
2,332,185	-		AO356_10340	0.20	-1.3
2,332,185	-		AO356_10340	0.20	-1.6
2,332,185	-		AO356_10340	0.20	-2.0
2,332,185	-		AO356_10340	0.20	-2.2
2,332,185	-		AO356_10340	0.20	-1.0
2,332,185	-		AO356_10340	0.20	-0.8
2,332,185	-		AO356_10340	0.20	-1.2
2,332,283	+		AO356_10340	0.35	-1.9
2,332,378	-		AO356_10340	0.50	-0.9
2,332,441	+		AO356_10340	0.59	-1.0
2,332,442	-		AO356_10340	0.60	-0.9
2,332,442	-		AO356_10340	0.60	-0.0
2,332,442	-		AO356_10340	0.60	-0.7
2,332,469	+		AO356_10340	0.64	-0.7
2,332,469	+		AO356_10340	0.64	-2.3
2,332,470	-		AO356_10340	0.64	-1.5
2,332,470	-		AO356_10340	0.64	-0.2
2,332,470	-		AO356_10340	0.64	-1.6
2,332,470	-		AO356_10340	0.64	-1.2
2,332,539	-		AO356_10340	0.74	-1.9
2,332,569	-		AO356_10340	0.79	-2.5
2,332,569	-		AO356_10340	0.79	+0.3
2,332,577	+		AO356_10340	0.80	-1.2
2,332,577	+		AO356_10340	0.80	-0.1
2,332,577	+		AO356_10340	0.80	-0.7
2,332,578	-		AO356_10340	0.80	-1.9
2,332,578	-		AO356_10340	0.80	+0.5
2,332,601	+		AO356_10340	0.84	+0.4
2,332,601	+		AO356_10340	0.84	-2.4
2,332,601	+		AO356_10340	0.84	-2.8
2,332,601	+		AO356_10340	0.84	-2.0
2,332,601	+		AO356_10340	0.84	-1.0
2,332,601	+		AO356_10340	0.84	-0.2
2,332,601	+		AO356_10340	0.84	-0.2
2,332,601	+		AO356_10340	0.84	-2.8
2,332,602	-		AO356_10340	0.84	-3.0
2,332,602	-		AO356_10340	0.84	-1.8
2,332,602	-		AO356_10340	0.84	-1.5
2,332,602	-		AO356_10340	0.84	-2.2
2,332,602	-		AO356_10340	0.84	-1.3
2,332,602	-		AO356_10340	0.84	-2.3
2,332,602	-		AO356_10340	0.84	-2.3
2,332,602	-		AO356_10340	0.84	-0.5
2,332,637	+		AO356_10340	0.89	-1.0
2,332,638	-		AO356_10340	0.89	-1.6
2,332,638	-		AO356_10340	0.89	-2.6
2,332,694	-				-1.2
2,332,714	+				-1.8
2,332,715	-				+0.5
2,332,715	-				-0.7
2,332,715	-				+1.1
2,332,750	-				+0.6
2,332,774	+				-0.0
2,332,774	+				-0.2
2,332,774	+				-0.2
2,332,774	+				+1.3
2,332,774	+				-0.6
2,332,775	-				+0.1
2,332,775	-				-0.1
2,332,775	-				+0.0
2,332,775	-				-1.9
2,332,775	-				-1.0
2,332,775	-				+1.3
2,332,775	-				-0.9
2,332,775	-				+1.5
2,332,775	-				+0.9
2,332,775	-				+0.0
2,332,775	-				-0.1
2,332,779	+				-0.9
2,332,780	-				+0.1
2,332,780	-				+0.8
2,332,780	-				+1.8
2,332,882	+				-0.3
2,332,883	-				-1.0
2,332,883	-				-0.1
2,332,883	-				-0.8
2,332,896	-				-1.5
2,332,896	-				-0.6
2,332,918	+		AO356_10345	0.14	+0.6
2,332,919	-		AO356_10345	0.14	-0.5
2,332,931	+		AO356_10345	0.17	+0.1
2,333,001	+		AO356_10345	0.31	+0.2
2,333,002	-		AO356_10345	0.31	-1.8
2,333,235	+		AO356_10345	0.80	+1.0
2,333,235	+		AO356_10345	0.80	-0.7
2,333,235	+		AO356_10345	0.80	+0.5
2,333,235	+		AO356_10345	0.80	-0.5
2,333,236	-		AO356_10345	0.80	-1.1
2,333,236	-		AO356_10345	0.80	-1.3
2,333,236	-		AO356_10345	0.80	-2.2
2,333,236	-		AO356_10345	0.80	-1.1
2,333,236	-		AO356_10345	0.80	-0.4
2,333,236	-		AO356_10345	0.80	-0.5
2,333,236	-		AO356_10345	0.80	-3.0
2,333,236	-		AO356_10345	0.80	+0.0
2,333,236	-		AO356_10345	0.80	+0.3
2,333,236	-		AO356_10345	0.80	-1.5
2,333,361	+				-0.0
2,333,361	+				-0.6
2,333,361	+				+0.8
2,333,361	+				+0.8
2,333,361	+				+1.2
2,333,362	-				+0.9
2,333,388	+				-0.2
2,333,388	+				+0.4
2,333,389	-				-1.0
2,333,389	-				-1.6
2,333,424	+				-0.8
2,333,425	-				+0.5
2,333,425	-				+1.0
2,333,425	-				+0.5
2,333,425	-				+0.8
2,333,429	+				+0.3
2,333,429	+				+1.2
2,333,429	+				+0.4
2,333,429	+				+0.5
2,333,429	+				+0.2
2,333,429	+				-0.3
2,333,429	+				-0.3
2,333,430	-				-0.6
2,333,430	-				+1.0
2,333,430	-				-0.0
2,333,430	-				+0.0
2,333,430	-				-0.5
2,333,430	-				+0.1
2,333,430	-				-1.3
2,333,473	+				+0.7
2,333,473	+				-1.8
2,333,474	-				-0.4
2,333,474	-				-0.2
2,333,644	+		AO356_10350	0.13	-0.1
2,333,645	-		AO356_10350	0.13	-0.2
2,333,671	+		AO356_10350	0.14	+0.2
2,333,671	+		AO356_10350	0.14	+0.8