Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_08715

Experiment: 1-ethyl-3-methylimidazolium acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 20 mM
1,960,250	-				-0.9
1,960,333	+		AO356_08710	0.16	-1.2
1,960,333	+		AO356_08710	0.16	+0.2
1,960,333	+		AO356_08710	0.16	-2.5
1,960,333	+		AO356_08710	0.16	-0.7
1,960,333	+		AO356_08710	0.16	-1.9
1,960,334	-		AO356_08710	0.16	-0.3
1,960,334	-		AO356_08710	0.16	-2.0
1,960,334	-		AO356_08710	0.16	-1.3
1,960,337	+		AO356_08710	0.17	-0.3
1,960,337	+		AO356_08710	0.17	+0.4
1,960,337	+		AO356_08710	0.17	-0.4
1,960,337	+		AO356_08710	0.17	-1.4
1,960,337	+		AO356_08710	0.17	-0.8
1,960,337	+		AO356_08710	0.17	-1.1
1,960,337	+		AO356_08710	0.17	+0.2
1,960,337	+		AO356_08710	0.17	-1.2
1,960,338	-		AO356_08710	0.17	+2.0
1,960,338	-		AO356_08710	0.17	-1.3
1,960,338	-		AO356_08710	0.17	-0.3
1,960,338	-		AO356_08710	0.17	+0.2
1,960,338	-		AO356_08710	0.17	-0.7
1,960,338	-		AO356_08710	0.17	-1.5
1,960,338	-		AO356_08710	0.17	-0.1
1,960,338	-		AO356_08710	0.17	+0.1
1,960,396	+		AO356_08710	0.24	-1.4
1,960,396	+		AO356_08710	0.24	-2.7
1,960,397	-		AO356_08710	0.24	-0.8
1,960,410	-		AO356_08710	0.25	-1.5
1,960,422	-		AO356_08710	0.27	-0.8
1,960,422	-		AO356_08710	0.27	-0.8
1,960,422	-		AO356_08710	0.27	-0.8
1,960,594	+		AO356_08710	0.47	-0.2
1,960,594	+		AO356_08710	0.47	-1.1
1,960,594	+		AO356_08710	0.47	-0.7
1,960,594	+		AO356_08710	0.47	-1.9
1,960,595	-		AO356_08710	0.47	+0.5
1,960,663	+		AO356_08710	0.55	-2.4
1,960,663	+		AO356_08710	0.55	-2.3
1,960,663	+		AO356_08710	0.55	-2.3
1,960,664	-		AO356_08710	0.55	-1.8
1,960,664	-		AO356_08710	0.55	-0.2
1,960,664	-		AO356_08710	0.55	+2.0
1,960,664	-		AO356_08710	0.55	-0.9
1,960,664	-		AO356_08710	0.55	+0.7
1,960,664	-		AO356_08710	0.55	-1.3
1,960,711	+		AO356_08710	0.61	-0.8
1,960,801	+		AO356_08710	0.71	-0.5
1,960,802	-		AO356_08710	0.71	+0.2
1,960,802	-		AO356_08710	0.71	+1.4
1,960,825	+		AO356_08710	0.74	-0.7
1,960,825	+		AO356_08710	0.74	-0.1
1,960,839	-		AO356_08710	0.76	-0.5
1,960,889	+		AO356_08710	0.82	+0.3
1,960,889	+		AO356_08710	0.82	-1.7
1,960,889	+		AO356_08710	0.82	-0.4
1,960,889	+		AO356_08710	0.82	-0.7
1,960,889	+		AO356_08710	0.82	-1.1
1,960,889	+		AO356_08710	0.82	-0.6
1,960,890	-		AO356_08710	0.82	+0.1
1,960,890	-		AO356_08710	0.82	-0.9
1,960,890	-		AO356_08710	0.82	-0.1
1,960,890	-		AO356_08710	0.82	-0.5
1,960,890	-		AO356_08710	0.82	-0.3
1,960,891	+		AO356_08710	0.82	-2.2
1,960,891	+		AO356_08710	0.82	+0.2
1,960,891	+		AO356_08710	0.82	-1.6
1,960,891	+		AO356_08710	0.82	-2.0
1,960,892	-		AO356_08710	0.82	-0.1
1,960,892	-		AO356_08710	0.82	-2.3
1,960,892	-		AO356_08710	0.82	-0.9
1,960,892	-		AO356_08710	0.82	+1.5
1,961,039	+				-1.3
1,961,040	-				-1.2
1,961,045	+				-0.6
1,961,045	+				-0.3
1,961,045	+				-0.8
1,961,045	+				-0.1
1,961,045	+				-1.2
1,961,045	+				+0.7
1,961,045	+				-1.6
1,961,045	+				-0.8
1,961,045	+				-0.8
1,961,045	+				-0.1
1,961,045	+				-0.4
1,961,046	-				+0.2
1,961,046	-				-0.8
1,961,046	-				-0.8
1,961,046	-				-1.9
1,961,046	-				+0.2
1,961,046	-				+0.1
1,961,046	-				+0.8
1,961,049	+				-1.9
1,961,049	+				-1.7
1,961,049	+				-0.7
1,961,049	+				-1.5
1,961,049	+				-0.4
1,961,049	+				-0.3
1,961,050	-				+1.5
1,961,050	-				-1.3
1,961,050	-				+0.5
1,961,056	+				-0.4
1,961,056	+				-0.1
1,961,056	+				-1.1
1,961,057	-				+1.9
1,961,057	-				+0.1
1,961,057	-				-1.0
1,961,057	-				-0.7
1,961,057	-				+0.3
1,961,060	+				-1.0
1,961,060	+				-0.7
1,961,060	+				-0.7
1,961,060	+				-1.1
1,961,060	+				-0.3
1,961,060	+				-0.3
1,961,060	+				+0.7
1,961,060	+				-0.3
1,961,061	-				+0.9
1,961,061	-				+0.4
1,961,061	-				+0.7
1,961,061	-				+0.3
1,961,061	-				-0.2
1,961,064	+				-2.5
1,961,064	+				+0.6
1,961,065	-				-0.0
1,961,065	-				-0.6
1,961,065	-				+0.3
1,961,084	-				+1.5
1,961,111	+				-1.0
1,961,111	+				+0.0
1,961,111	+				-0.8
1,961,111	+				-0.5
1,961,111	+				-0.4
1,961,111	+				-1.4
1,961,112	-				-0.4
1,961,112	-				+1.2
1,961,112	-				-0.3
1,961,112	-				+0.2
1,961,115	+				-1.1
1,961,116	-				-0.1
1,961,116	-				+0.4
1,961,137	+				-1.6
1,961,137	+				-0.5
1,961,138	-				-2.1
1,961,138	-				+0.1
1,961,138	-				+0.5
1,961,138	-				+1.1
1,961,138	-				-0.8
1,961,139	+				-0.3
1,961,139	+				-0.5
1,961,139	+				+0.1
1,961,139	+				-1.3
1,961,140	-				+1.6
1,961,140	-				-1.2
1,961,140	-				-0.5
1,961,140	-				-0.5
1,961,181	+				-0.6
1,961,192	+				-2.3
1,961,192	+				-0.3
1,961,193	-				-0.4
1,961,193	-				-0.2
1,961,543	+		AO356_08715	0.22	+1.2
1,961,543	+		AO356_08715	0.22	-1.1
1,961,543	+		AO356_08715	0.22	+0.4
1,961,543	+		AO356_08715	0.22	-0.9
1,961,543	+		AO356_08715	0.22	+0.2
1,961,543	+		AO356_08715	0.22	+1.0
1,961,544	-		AO356_08715	0.22	+0.3
1,961,544	-		AO356_08715	0.22	+0.3
1,961,642	+		AO356_08715	0.28	+0.7
1,961,642	+		AO356_08715	0.28	+0.0
1,961,642	+		AO356_08715	0.28	-0.4
1,961,642	+		AO356_08715	0.28	+0.1
1,961,642	+		AO356_08715	0.28	+0.3
1,961,642	+		AO356_08715	0.28	+0.5
1,961,642	+		AO356_08715	0.28	+0.4
1,961,642	+		AO356_08715	0.28	-1.3
1,961,642	+		AO356_08715	0.28	-0.6
1,961,642	+		AO356_08715	0.28	-0.3
1,961,642	+		AO356_08715	0.28	+0.5
1,961,642	+		AO356_08715	0.28	+0.1
1,961,642	+		AO356_08715	0.28	+0.1
1,961,642	+		AO356_08715	0.28	-0.1
1,961,642	+		AO356_08715	0.28	+0.4
1,961,643	-		AO356_08715	0.28	-0.0
1,961,643	-		AO356_08715	0.28	-0.2
1,961,643	-		AO356_08715	0.28	-0.1
1,961,643	-		AO356_08715	0.28	-0.7
1,961,643	-		AO356_08715	0.28	+0.8
1,961,643	-		AO356_08715	0.28	+0.7
1,961,643	-		AO356_08715	0.28	-1.3
1,961,643	-		AO356_08715	0.28	+1.7
1,961,643	-		AO356_08715	0.28	+0.5
1,961,643	-		AO356_08715	0.28	+1.0
1,961,643	-		AO356_08715	0.28	+1.5
1,961,643	-		AO356_08715	0.28	+0.5
1,961,643	-		AO356_08715	0.28	-0.4
1,961,759	+		AO356_08715	0.36	+1.2
1,961,759	+		AO356_08715	0.36	+0.3
1,961,759	+		AO356_08715	0.36	-0.5
1,961,760	-		AO356_08715	0.36	+1.0
1,961,858	+		AO356_08715	0.42	-0.1
1,961,858	+		AO356_08715	0.42	-0.4
1,961,858	+		AO356_08715	0.42	-0.1
1,961,858	+		AO356_08715	0.42	-0.1
1,961,990	+		AO356_08715	0.51	-2.5
1,961,990	+		AO356_08715	0.51	-0.1
1,961,990	+		AO356_08715	0.51	-0.6
1,961,990	+		AO356_08715	0.51	-0.1
1,961,991	-		AO356_08715	0.51	-0.1
1,961,991	-		AO356_08715	0.51	+0.4
1,961,991	-		AO356_08715	0.51	-0.4
1,961,991	-		AO356_08715	0.51	+1.0
1,961,991	-		AO356_08715	0.51	+0.3
1,962,062	-		AO356_08715	0.55	+0.1
1,962,062	-		AO356_08715	0.55	+1.0
1,962,062	-		AO356_08715	0.55	+0.8
1,962,132	+		AO356_08715	0.60	+0.9
1,962,185	+		AO356_08715	0.63	-0.7
1,962,186	-		AO356_08715	0.63	-0.3
1,962,413	+		AO356_08715	0.78	-2.8
1,962,413	+		AO356_08715	0.78	+0.7
1,962,413	+		AO356_08715	0.78	-0.7
1,962,414	-		AO356_08715	0.78	+0.4
1,962,414	-		AO356_08715	0.78	+1.2
1,962,414	-		AO356_08715	0.78	-0.5
1,962,459	+		AO356_08715	0.81	+1.2
1,962,459	+		AO356_08715	0.81	+0.1
1,962,460	-		AO356_08715	0.81	-1.0
1,962,460	-		AO356_08715	0.81	-0.4
1,962,460	-		AO356_08715	0.81	+0.8
1,962,480	-		AO356_08715	0.82	-0.9
1,962,480	-		AO356_08715	0.82	+0.7
1,962,552	-		AO356_08715	0.87	-0.5
1,962,552	-		AO356_08715	0.87	+0.9
1,962,630	+				+0.0
1,962,630	+				+0.7
1,962,630	+				+0.4
1,962,630	+				-0.4
1,962,630	+				-1.0
1,962,630	+				-0.4
1,962,630	+				-0.4
1,962,631	-				+0.3
1,962,631	-				+0.5
1,962,631	-				-0.7
1,962,631	-				+0.2
1,962,631	-				-0.0
1,962,631	-				+0.3
1,962,631	-				+0.1
1,962,631	-				+0.2
1,962,631	-				+1.2
1,962,631	-				-0.8
1,962,631	-				-1.0
1,962,680	+				-0.6
1,962,680	+				-1.5
1,962,680	+				+0.9
1,962,680	+				-0.2
1,962,681	-				-0.4
1,962,681	-				-0.3
1,962,681	-				-0.5
1,962,708	+				-0.1
1,962,708	+				-0.7
1,962,708	+				+0.3
1,962,726	+				+0.5
1,962,726	+				+0.7
1,962,726	+				+1.2
1,962,726	+				+0.4
1,962,726	+				-0.7
1,962,726	+				+0.4
1,962,726	+				-0.6
1,962,726	+				-0.3
1,962,726	+				-0.6
1,962,727	-				+0.6
1,962,727	-				-0.8
1,962,727	-				+0.2
1,962,727	-				-1.0
1,962,727	-				-0.4
1,962,732	+				+1.4
1,962,732	+				-0.6
1,962,732	+				-0.2
1,962,733	-				+1.3
1,962,757	+				-0.5
1,962,757	+				+0.7
1,962,757	+				-0.6
1,962,757	+				-0.1
1,962,757	+				-0.3
1,962,757	+				-1.1
1,962,757	+				+0.8
1,962,758	-				+1.1
1,962,758	-				+0.9
1,962,758	-				-0.0
1,962,758	-				+0.1
1,962,758	-				-1.6
1,962,758	-				-0.5
1,963,042	+		AO356_08720	0.31	+0.2
1,963,042	+		AO356_08720	0.31	+0.4
1,963,042	+		AO356_08720	0.31	+0.7
1,963,042	+		AO356_08720	0.31	-0.0
1,963,042	+		AO356_08720	0.31	-0.3
1,963,042	+		AO356_08720	0.31	-0.1
1,963,042	+		AO356_08720	0.31	-1.0
1,963,051	+		AO356_08720	0.32	+0.9
1,963,086	+		AO356_08720	0.36	+0.6
1,963,086	+		AO356_08720	0.36	-0.7
1,963,086	+		AO356_08720	0.36	-0.8
1,963,086	+		AO356_08720	0.36	+0.9
1,963,120	+		AO356_08720	0.40	+0.3
1,963,120	+		AO356_08720	0.40	-0.4
1,963,120	+		AO356_08720	0.40	-0.9
1,963,120	+		AO356_08720	0.40	-1.9
1,963,120	+		AO356_08720	0.40	+0.9
1,963,120	+		AO356_08720	0.40	-0.5
1,963,120	+		AO356_08720	0.40	+0.4
1,963,120	+		AO356_08720	0.40	+1.0
1,963,120	+		AO356_08720	0.40	-0.1
1,963,126	+		AO356_08720	0.41	-1.4
1,963,249	+		AO356_08720	0.56	-0.3
1,963,312	+		AO356_08720	0.64	-0.3
1,963,312	+		AO356_08720	0.64	-1.1
1,963,312	+		AO356_08720	0.64	+0.4
1,963,312	+		AO356_08720	0.64	+0.4
1,963,510	+		AO356_08720	0.88	-0.7
1,963,510	+		AO356_08720	0.88	-0.7
1,963,534	+				-0.7
1,963,552	+				-0.2
1,963,616	+				+0.3
1,963,616	+				+0.6
1,963,626	+				-2.6
1,963,626	+				+0.6