Experiment: 1-ethyl-3-methylimidazolium acetate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03475 and AO356_03480 are separated by 446 nucleotides AO356_03480 and AO356_03485 are separated by 106 nucleotides
AO356_03475: AO356_03475 - DNA gyrase subunit A, at 773,586 to 776,249
_03475
AO356_03480: AO356_03480 - methylthioribose-1-phosphate isomerase, at 776,696 to 777,772
_03480
AO356_03485: AO356_03485 - N-ethylammeline chlorohydrolase, at 777,879 to 779,210
_03485
Position (kb) 776
777
778 Strain fitness (log2 ratio) -2
-1
0
1
2 at 776.362 kb on - strand at 776.446 kb on + strand at 776.446 kb on + strand at 776.447 kb on - strand at 776.470 kb on + strand at 776.470 kb on + strand at 776.470 kb on + strand at 776.471 kb on - strand at 776.471 kb on - strand at 776.471 kb on - strand at 776.471 kb on - strand at 776.471 kb on - strand at 776.474 kb on + strand at 776.474 kb on + strand at 776.475 kb on - strand at 776.475 kb on - strand at 776.475 kb on - strand at 776.514 kb on + strand at 776.514 kb on + strand at 776.515 kb on - strand at 776.515 kb on - strand at 776.515 kb on - strand at 776.515 kb on - strand at 776.515 kb on - strand at 776.568 kb on + strand at 776.804 kb on - strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 776.991 kb on + strand, within AO356_03480 at 777.079 kb on + strand, within AO356_03480 at 777.079 kb on + strand, within AO356_03480 at 777.080 kb on - strand, within AO356_03480 at 777.211 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.213 kb on + strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.214 kb on - strand, within AO356_03480 at 777.226 kb on + strand, within AO356_03480 at 777.332 kb on + strand, within AO356_03480 at 777.579 kb on + strand, within AO356_03480 at 777.580 kb on - strand, within AO356_03480 at 777.580 kb on - strand, within AO356_03480 at 777.691 kb on + strand at 777.691 kb on + strand at 777.691 kb on + strand at 777.691 kb on + strand at 777.691 kb on + strand at 777.691 kb on + strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.692 kb on - strand at 777.708 kb on + strand at 777.708 kb on + strand at 777.708 kb on + strand at 777.709 kb on - strand at 777.709 kb on - strand at 777.709 kb on - strand at 777.758 kb on + strand at 777.759 kb on - strand at 777.808 kb on + strand at 777.809 kb on - strand at 777.811 kb on - strand at 777.811 kb on - strand at 777.811 kb on - strand at 777.811 kb on - strand at 777.811 kb on - strand at 777.839 kb on - strand at 777.840 kb on + strand at 777.840 kb on + strand at 777.840 kb on + strand at 777.840 kb on + strand at 777.855 kb on + strand at 777.855 kb on + strand at 777.855 kb on + strand at 777.855 kb on + strand at 777.855 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.907 kb on + strand at 777.908 kb on - strand at 777.910 kb on + strand at 777.910 kb on + strand at 777.952 kb on + strand at 777.952 kb on + strand at 777.952 kb on + strand at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.275 kb on + strand, within AO356_03485 at 778.467 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.469 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.535 kb on + strand, within AO356_03485 at 778.536 kb on - strand, within AO356_03485 at 778.536 kb on - strand, within AO356_03485 at 778.691 kb on - strand, within AO356_03485
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium acetate 20 mM remove 776,362 - +0.2 776,446 + +0.2 776,446 + -0.6 776,447 - +0.1 776,470 + -0.6 776,470 + -0.0 776,470 + -1.2 776,471 - -0.5 776,471 - +0.3 776,471 - -0.7 776,471 - +1.5 776,471 - -0.2 776,474 + -0.7 776,474 + -1.3 776,475 - -1.4 776,475 - +0.7 776,475 - +0.1 776,514 + +0.7 776,514 + -1.3 776,515 - -0.4 776,515 - -0.6 776,515 - +0.5 776,515 - -0.1 776,515 - -0.3 776,568 + -0.2 776,804 - AO356_03480 0.10 -0.4 776,991 + AO356_03480 0.27 -1.1 776,991 + AO356_03480 0.27 -1.1 776,991 + AO356_03480 0.27 +0.6 776,991 + AO356_03480 0.27 +0.6 776,991 + AO356_03480 0.27 -0.2 776,991 + AO356_03480 0.27 -0.3 776,991 + AO356_03480 0.27 -0.1 776,991 + AO356_03480 0.27 -0.5 777,079 + AO356_03480 0.36 +0.4 777,079 + AO356_03480 0.36 +0.5 777,080 - AO356_03480 0.36 -2.2 777,211 + AO356_03480 0.48 -0.4 777,213 + AO356_03480 0.48 -0.3 777,213 + AO356_03480 0.48 -0.0 777,213 + AO356_03480 0.48 +0.5 777,213 + AO356_03480 0.48 -0.2 777,213 + AO356_03480 0.48 +0.0 777,213 + AO356_03480 0.48 +0.3 777,213 + AO356_03480 0.48 -0.6 777,213 + AO356_03480 0.48 -0.8 777,213 + AO356_03480 0.48 +0.2 777,214 - AO356_03480 0.48 -0.2 777,214 - AO356_03480 0.48 +0.2 777,214 - AO356_03480 0.48 -1.0 777,214 - AO356_03480 0.48 -0.2 777,214 - AO356_03480 0.48 -0.7 777,214 - AO356_03480 0.48 -0.2 777,226 + AO356_03480 0.49 -0.5 777,332 + AO356_03480 0.59 -0.6 777,579 + AO356_03480 0.82 -0.7 777,580 - AO356_03480 0.82 -0.6 777,580 - AO356_03480 0.82 -0.6 777,691 + +2.0 777,691 + -0.2 777,691 + -2.6 777,691 + +0.4 777,691 + -1.0 777,691 + -0.4 777,692 - +0.2 777,692 - +0.4 777,692 - +0.1 777,692 - +0.2 777,692 - +0.7 777,692 - -0.0 777,692 - +1.1 777,692 - -1.5 777,692 - -0.2 777,692 - +0.2 777,692 - +0.7 777,708 + +0.1 777,708 + -0.4 777,708 + -0.1 777,709 - +0.9 777,709 - +0.0 777,709 - +0.1 777,758 + +0.4 777,759 - -0.3 777,808 + -0.4 777,809 - +0.1 777,811 - +0.3 777,811 - -0.8 777,811 - +0.4 777,811 - -0.6 777,811 - +0.8 777,839 - -0.1 777,840 + +1.0 777,840 + -0.4 777,840 + -0.0 777,840 + +0.1 777,855 + -1.0 777,855 + -0.7 777,855 + +1.0 777,855 + +0.8 777,855 + -0.4 777,907 + -0.5 777,907 + +0.1 777,907 + +1.8 777,907 + +0.7 777,907 + -0.9 777,907 + +1.0 777,907 + +0.5 777,907 + +1.0 777,908 - +0.2 777,910 + +0.7 777,910 + -0.4 777,952 + +0.0 777,952 + -0.9 777,952 + -0.0 778,275 + AO356_03485 0.30 -0.3 778,275 + AO356_03485 0.30 -0.2 778,275 + AO356_03485 0.30 -0.6 778,275 + AO356_03485 0.30 +1.5 778,275 + AO356_03485 0.30 -0.5 778,275 + AO356_03485 0.30 +1.1 778,275 + AO356_03485 0.30 -1.3 778,275 + AO356_03485 0.30 +0.3 778,275 + AO356_03485 0.30 -0.1 778,275 + AO356_03485 0.30 -0.0 778,275 + AO356_03485 0.30 +0.3 778,275 + AO356_03485 0.30 +1.3 778,275 + AO356_03485 0.30 +0.7 778,275 + AO356_03485 0.30 -0.6 778,275 + AO356_03485 0.30 +0.1 778,275 + AO356_03485 0.30 -0.2 778,275 + AO356_03485 0.30 +0.1 778,275 + AO356_03485 0.30 +0.7 778,467 + AO356_03485 0.44 -1.0 778,469 + AO356_03485 0.44 +0.4 778,469 + AO356_03485 0.44 +0.3 778,469 + AO356_03485 0.44 +0.0 778,469 + AO356_03485 0.44 +2.5 778,469 + AO356_03485 0.44 +1.7 778,469 + AO356_03485 0.44 +0.3 778,535 + AO356_03485 0.49 +0.6 778,535 + AO356_03485 0.49 +0.1 778,535 + AO356_03485 0.49 +0.6 778,535 + AO356_03485 0.49 +0.7 778,535 + AO356_03485 0.49 -0.6 778,535 + AO356_03485 0.49 -1.1 778,536 - AO356_03485 0.49 +1.3 778,536 - AO356_03485 0.49 +0.3 778,691 - AO356_03485 0.61 -2.2
Or see this region's nucleotide sequence