Strain Fitness in Shewanella loihica PV-4 around Shew_2639
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,115,421 | + | Shew_2639 | 0.64 | -0.1 | |
3,115,652 | - | -0.1 | |||
3,115,713 | + | +2.1 | |||
3,115,721 | - | +0.0 | |||
3,115,882 | + | purU | Shew_2640 | 0.28 | +0.4 |
3,116,071 | - | purU | Shew_2640 | 0.50 | -0.4 |
3,116,127 | - | purU | Shew_2640 | 0.57 | -0.0 |
3,116,421 | + | +0.3 | |||
3,116,421 | + | -0.1 | |||
3,116,429 | - | +0.6 | |||
3,116,440 | + | -2.2 | |||
3,116,448 | - | -0.8 |
Or see this region's nucleotide sequence