Strain Fitness in Shewanella loihica PV-4 around Shew_2497
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,935,299 | - | -7.3 | |||
2,935,360 | + | Shew_2496 | 0.18 | -2.0 | |
2,935,611 | - | Shew_2496 | 0.55 | +1.8 | |
2,935,611 | - | Shew_2496 | 0.55 | +1.8 | |
2,935,682 | - | Shew_2496 | 0.65 | +1.7 | |
2,935,953 | + | +2.5 | |||
2,936,122 | + | -9.2 | |||
2,936,130 | - | -8.7 | |||
2,936,130 | - | -6.7 | |||
2,936,142 | - | -6.8 | |||
2,936,142 | - | -3.2 | |||
2,936,249 | + | Shew_2497 | 0.14 | -7.3 | |
2,936,436 | + | Shew_2497 | 0.32 | -6.2 | |
2,936,436 | + | Shew_2497 | 0.32 | -6.3 | |
2,936,444 | - | Shew_2497 | 0.32 | -6.4 | |
2,936,517 | + | Shew_2497 | 0.39 | -4.7 | |
2,936,810 | + | Shew_2497 | 0.67 | -5.8 | |
2,936,961 | + | Shew_2497 | 0.81 | -7.7 | |
2,937,207 | - | +3.3 | |||
2,937,282 | - | +3.2 |
Or see this region's nucleotide sequence