Strain Fitness in Shewanella loihica PV-4 around Shew_2494
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,933,655 | + | Shew_2493 | 0.41 | -1.2 | |
2,934,148 | + | Shew_2493 | 0.75 | -1.3 | |
2,934,187 | - | Shew_2493 | 0.78 | -0.6 | |
2,934,524 | + | -1.0 | |||
2,934,613 | + | -6.4 | |||
2,934,636 | + | Shew_2494 | 0.11 | -5.8 | |
2,934,926 | + | Shew_2494 | 0.84 | -6.9 | |
2,935,299 | - | -7.3 | |||
2,935,360 | + | Shew_2496 | 0.18 | -2.0 | |
2,935,611 | - | Shew_2496 | 0.55 | +1.8 | |
2,935,611 | - | Shew_2496 | 0.55 | +1.8 | |
2,935,682 | - | Shew_2496 | 0.65 | +1.7 | |
2,935,953 | + | +2.5 |
Or see this region's nucleotide sequence