Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2380 and Shew_2381 are separated by 50 nucleotides Shew_2381 and Shew_2382 are separated by 263 nucleotides
Shew_2380: Shew_2380 - putative sulfate transport protein CysZ (RefSeq), at 2,785,909 to 2,786,682
_2380
Shew_2381: Shew_2381 - RDD domain-containing protein (RefSeq), at 2,786,733 to 2,787,977
_2381
Shew_2382: Shew_2382 - cysteine synthase A (RefSeq), at 2,788,241 to 2,789,209
_2382
Position (kb)
2786
2787
2788 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2786.257 kb on + strand, within Shew_2380 at 2786.349 kb on + strand, within Shew_2380 at 2786.410 kb on + strand, within Shew_2380 at 2786.585 kb on + strand, within Shew_2380 at 2786.710 kb on - strand at 2786.750 kb on + strand at 2787.111 kb on - strand, within Shew_2381 at 2787.277 kb on + strand, within Shew_2381 at 2787.421 kb on - strand, within Shew_2381 at 2787.482 kb on + strand, within Shew_2381 at 2787.482 kb on + strand, within Shew_2381 at 2787.482 kb on + strand, within Shew_2381 at 2787.490 kb on - strand, within Shew_2381 at 2787.490 kb on - strand, within Shew_2381 at 2787.517 kb on - strand, within Shew_2381 at 2787.517 kb on - strand, within Shew_2381 at 2787.814 kb on + strand, within Shew_2381 at 2787.814 kb on + strand, within Shew_2381 at 2787.814 kb on + strand, within Shew_2381 at 2787.822 kb on - strand, within Shew_2381 at 2788.466 kb on + strand, within Shew_2382 at 2788.530 kb on + strand, within Shew_2382 at 2788.557 kb on - strand, within Shew_2382 at 2788.630 kb on + strand, within Shew_2382 at 2788.884 kb on - strand, within Shew_2382
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 2,786,257 + Shew_2380 0.45 -0.5 2,786,349 + Shew_2380 0.57 +0.0 2,786,410 + Shew_2380 0.65 -0.1 2,786,585 + Shew_2380 0.87 -0.9 2,786,710 - +1.0 2,786,750 + -0.3 2,787,111 - Shew_2381 0.30 +1.1 2,787,277 + Shew_2381 0.44 +0.0 2,787,421 - Shew_2381 0.55 +0.1 2,787,482 + Shew_2381 0.60 +0.7 2,787,482 + Shew_2381 0.60 +0.4 2,787,482 + Shew_2381 0.60 +0.1 2,787,490 - Shew_2381 0.61 +0.1 2,787,490 - Shew_2381 0.61 +0.1 2,787,517 - Shew_2381 0.63 -0.6 2,787,517 - Shew_2381 0.63 +0.1 2,787,814 + Shew_2381 0.87 +0.5 2,787,814 + Shew_2381 0.87 -1.0 2,787,814 + Shew_2381 0.87 -0.2 2,787,822 - Shew_2381 0.87 +0.1 2,788,466 + Shew_2382 0.23 +4.5 2,788,530 + Shew_2382 0.30 +4.1 2,788,557 - Shew_2382 0.33 +4.3 2,788,630 + Shew_2382 0.40 +4.3 2,788,884 - Shew_2382 0.66 +4.4
Or see this region's nucleotide sequence