Strain Fitness in Shewanella loihica PV-4 around Shew_2205
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,564,354 | - | Shew_2204 | 0.22 | +0.7 | |
| 2,565,269 | + | -0.6 | |||
| 2,565,506 | + | Shew_2205 | 0.25 | -2.6 | |
| 2,565,654 | - | Shew_2205 | 0.37 | -0.2 | |
| 2,565,654 | - | Shew_2205 | 0.37 | +0.5 | |
| 2,565,846 | - | Shew_2205 | 0.53 | -0.6 | |
| 2,565,886 | - | Shew_2205 | 0.57 | +0.1 | |
| 2,566,436 | + | +0.0 | |||
| 2,566,529 | - | +0.3 | |||
| 2,566,999 | - | Shew_2206 | 0.26 | +0.9 | |
| 2,567,053 | + | Shew_2206 | 0.33 | +0.4 |
Or see this region's nucleotide sequence