Strain Fitness in Shewanella loihica PV-4 around Shew_2162

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
2,510,258	-		Shew_2161	0.70	+0.2
2,510,879	+				+0.5
2,511,101	+				+0.3
2,511,109	-				-0.2
2,511,952	-	cpdB	Shew_2162	0.36	+1.4
2,512,021	-	cpdB	Shew_2162	0.39	+0.4
2,512,162	+	cpdB	Shew_2162	0.46	+0.9
2,512,322	-	cpdB	Shew_2162	0.53	-0.2
2,512,343	+	cpdB	Shew_2162	0.54	-0.5
2,512,494	+	cpdB	Shew_2162	0.62	+0.3
2,512,862	+	cpdB	Shew_2162	0.79	+0.2
2,513,165	-				+0.2
2,513,952	+		Shew_2163	0.89	+1.4
2,514,210	-				-0.0
2,514,291	+				+0.7