Strain Fitness in Shewanella loihica PV-4 around Shew_1649
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,894,510 | - | Shew_1648 | 0.76 | -5.9 | |
1,894,821 | - | Shew_1648 | 0.85 | -6.6 | |
1,895,136 | - | -5.4 | |||
1,895,189 | - | -4.5 | |||
1,895,434 | + | Shew_1649 | 0.11 | -5.1 | |
1,895,459 | + | Shew_1649 | 0.13 | -4.6 | |
1,896,029 | + | Shew_1649 | 0.67 | -3.7 | |
1,896,630 | - | +1.5 | |||
1,896,672 | + | +0.3 | |||
1,896,672 | + | +0.2 | |||
1,896,948 | + | +0.4 | |||
1,897,177 | - | +3.6 | |||
1,897,182 | - | +2.8 |
Or see this region's nucleotide sequence