Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0851 and Shew_0852 are separated by 124 nucleotides Shew_0852 and Shew_0853 are separated by 399 nucleotides
Shew_0851: Shew_0851 - phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq), at 974,065 to 975,117
_0851
Shew_0852: Shew_0852 - hypothetical protein (RefSeq), at 975,242 to 975,418
_0852
Shew_0853: Shew_0853 - ABC transporter-related protein (RefSeq), at 975,818 to 977,593
_0853
Position (kb) 975
976 Strain fitness (log2 ratio) -2
-1
0
1 at 974.246 kb on + strand, within Shew_0851 at 974.266 kb on - strand, within Shew_0851 at 974.266 kb on - strand, within Shew_0851 at 974.318 kb on - strand, within Shew_0851 at 974.373 kb on - strand, within Shew_0851 at 974.373 kb on - strand, within Shew_0851 at 974.375 kb on + strand, within Shew_0851 at 974.395 kb on - strand, within Shew_0851 at 974.438 kb on - strand, within Shew_0851 at 974.601 kb on + strand, within Shew_0851 at 974.601 kb on + strand, within Shew_0851 at 974.609 kb on - strand, within Shew_0851 at 974.609 kb on - strand, within Shew_0851 at 974.653 kb on + strand, within Shew_0851 at 974.713 kb on - strand, within Shew_0851 at 974.792 kb on - strand, within Shew_0851 at 974.831 kb on - strand, within Shew_0851 at 974.941 kb on - strand, within Shew_0851 at 975.038 kb on - strand at 975.157 kb on + strand at 975.230 kb on + strand at 975.349 kb on - strand, within Shew_0852 at 975.372 kb on - strand, within Shew_0852 at 975.400 kb on + strand, within Shew_0852 at 975.468 kb on + strand at 975.477 kb on - strand at 975.478 kb on + strand at 975.478 kb on + strand at 975.478 kb on + strand at 975.478 kb on + strand at 975.478 kb on + strand at 975.478 kb on + strand at 975.486 kb on - strand at 975.486 kb on - strand at 975.662 kb on - strand at 975.734 kb on - strand at 975.996 kb on + strand, within Shew_0853 at 976.014 kb on - strand, within Shew_0853 at 976.062 kb on + strand, within Shew_0853 at 976.062 kb on + strand, within Shew_0853 at 976.070 kb on - strand, within Shew_0853 at 976.094 kb on - strand, within Shew_0853
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 974,246 + Shew_0851 0.17 +0.3 974,266 - Shew_0851 0.19 +1.0 974,266 - Shew_0851 0.19 +0.2 974,318 - Shew_0851 0.24 +0.4 974,373 - Shew_0851 0.29 +0.2 974,373 - Shew_0851 0.29 -0.7 974,375 + Shew_0851 0.29 -0.2 974,395 - Shew_0851 0.31 -0.1 974,438 - Shew_0851 0.35 +0.2 974,601 + Shew_0851 0.51 +0.2 974,601 + Shew_0851 0.51 -0.3 974,609 - Shew_0851 0.52 +0.3 974,609 - Shew_0851 0.52 +0.0 974,653 + Shew_0851 0.56 -0.3 974,713 - Shew_0851 0.62 +0.4 974,792 - Shew_0851 0.69 -1.0 974,831 - Shew_0851 0.73 +0.2 974,941 - Shew_0851 0.83 +0.2 975,038 - -0.2 975,157 + +0.2 975,230 + -1.4 975,349 - Shew_0852 0.60 -1.4 975,372 - Shew_0852 0.73 -1.8 975,400 + Shew_0852 0.89 -1.7 975,468 + -1.2 975,477 - -0.8 975,478 + -0.3 975,478 + -1.7 975,478 + -2.1 975,478 + -2.7 975,478 + -1.5 975,478 + -1.5 975,486 - -0.7 975,486 - -1.6 975,662 - +0.3 975,734 - +0.0 975,996 + Shew_0853 0.10 -0.2 976,014 - Shew_0853 0.11 +0.4 976,062 + Shew_0853 0.14 -0.1 976,062 + Shew_0853 0.14 +0.2 976,070 - Shew_0853 0.14 -0.2 976,094 - Shew_0853 0.16 +0.4
Or see this region's nucleotide sequence