Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2883

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_2882 and Dshi_2883 are separated by 189 nucleotidesDshi_2883 and Dshi_2884 are separated by 4 nucleotides Dshi_2882: Dshi_2882 - succinyl-CoA synthetase, alpha subunit (RefSeq), at 3,035,436 to 3,036,317 _2882 Dshi_2883: Dshi_2883 - 2-oxoglutarate dehydrogenase, E1 subunit (RefSeq), at 3,036,507 to 3,039,470 _2883 Dshi_2884: Dshi_2884 - 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase (RefSeq), at 3,039,475 to 3,040,965 _2884 Position (kb) 3036 3037 3038 3039 3040Strain fitness (log2 ratio) -1 0 1at 3036.356 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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3,036,356 - -1.3

Or see this region's nucleotide sequence