Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0657 and Dshi_0658 overlap by 4 nucleotides Dshi_0658 and Dshi_0659 are separated by 177 nucleotides
Dshi_0657: Dshi_0657 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 659,994 to 661,172
_0657
Dshi_0658: Dshi_0658 - ABC transporter related (RefSeq), at 661,169 to 662,770
_0658
Dshi_0659: Dshi_0659 - oxygen-independent coproporphyrinogen III oxidase (RefSeq), at 662,948 to 664,309
_0659
Position (kb) 661
662
663 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 660.316 kb on + strand, within Dshi_0657 at 660.334 kb on + strand, within Dshi_0657 at 660.342 kb on - strand, within Dshi_0657 at 660.368 kb on + strand, within Dshi_0657 at 660.416 kb on + strand, within Dshi_0657 at 660.433 kb on - strand, within Dshi_0657 at 660.633 kb on + strand, within Dshi_0657 at 660.756 kb on - strand, within Dshi_0657 at 660.772 kb on - strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.792 kb on + strand, within Dshi_0657 at 660.810 kb on - strand, within Dshi_0657 at 660.900 kb on + strand, within Dshi_0657 at 661.235 kb on - strand at 661.254 kb on + strand at 661.254 kb on + strand at 661.368 kb on - strand, within Dshi_0658 at 661.394 kb on - strand, within Dshi_0658 at 661.521 kb on + strand, within Dshi_0658 at 661.673 kb on - strand, within Dshi_0658 at 661.811 kb on - strand, within Dshi_0658 at 661.811 kb on - strand, within Dshi_0658 at 661.853 kb on - strand, within Dshi_0658 at 661.886 kb on + strand, within Dshi_0658 at 661.991 kb on - strand, within Dshi_0658 at 662.026 kb on + strand, within Dshi_0658 at 662.103 kb on + strand, within Dshi_0658 at 662.104 kb on - strand, within Dshi_0658 at 662.172 kb on + strand, within Dshi_0658 at 662.214 kb on - strand, within Dshi_0658 at 662.261 kb on - strand, within Dshi_0658 at 662.273 kb on + strand, within Dshi_0658 at 662.311 kb on + strand, within Dshi_0658 at 662.319 kb on - strand, within Dshi_0658 at 662.348 kb on - strand, within Dshi_0658 at 662.352 kb on + strand, within Dshi_0658 at 662.509 kb on - strand, within Dshi_0658 at 662.590 kb on + strand, within Dshi_0658 at 662.590 kb on + strand, within Dshi_0658 at 662.591 kb on + strand, within Dshi_0658 at 662.613 kb on + strand at 662.613 kb on + strand at 662.613 kb on + strand at 662.614 kb on + strand at 662.637 kb on + strand at 662.845 kb on + strand at 663.037 kb on + strand at 663.099 kb on - strand, within Dshi_0659 at 663.112 kb on - strand, within Dshi_0659 at 663.116 kb on + strand, within Dshi_0659 at 663.122 kb on - strand, within Dshi_0659 at 663.246 kb on - strand, within Dshi_0659 at 663.301 kb on + strand, within Dshi_0659 at 663.311 kb on - strand, within Dshi_0659 at 663.312 kb on + strand, within Dshi_0659 at 663.375 kb on - strand, within Dshi_0659 at 663.508 kb on + strand, within Dshi_0659 at 663.516 kb on - strand, within Dshi_0659 at 663.520 kb on + strand, within Dshi_0659 at 663.530 kb on + strand, within Dshi_0659
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 660,316 + Dshi_0657 0.27 +0.4 660,334 + Dshi_0657 0.29 +0.5 660,342 - Dshi_0657 0.30 -0.9 660,368 + Dshi_0657 0.32 -2.2 660,416 + Dshi_0657 0.36 -1.3 660,433 - Dshi_0657 0.37 +0.8 660,633 + Dshi_0657 0.54 -2.1 660,756 - Dshi_0657 0.65 -1.8 660,772 - Dshi_0657 0.66 -1.6 660,792 + Dshi_0657 0.68 -1.8 660,792 + Dshi_0657 0.68 -3.0 660,792 + Dshi_0657 0.68 -1.0 660,810 - Dshi_0657 0.69 -2.1 660,900 + Dshi_0657 0.77 -0.6 661,235 - -0.7 661,254 + -2.0 661,254 + -0.8 661,368 - Dshi_0658 0.12 -2.4 661,394 - Dshi_0658 0.14 -1.8 661,521 + Dshi_0658 0.22 -0.9 661,673 - Dshi_0658 0.31 -1.6 661,811 - Dshi_0658 0.40 +0.3 661,811 - Dshi_0658 0.40 -0.9 661,853 - Dshi_0658 0.43 -1.8 661,886 + Dshi_0658 0.45 -0.8 661,991 - Dshi_0658 0.51 -1.6 662,026 + Dshi_0658 0.53 -0.3 662,103 + Dshi_0658 0.58 -0.8 662,104 - Dshi_0658 0.58 -2.6 662,172 + Dshi_0658 0.63 -0.3 662,214 - Dshi_0658 0.65 -1.9 662,261 - Dshi_0658 0.68 -2.4 662,273 + Dshi_0658 0.69 -1.4 662,311 + Dshi_0658 0.71 -3.7 662,319 - Dshi_0658 0.72 -2.0 662,348 - Dshi_0658 0.74 -1.2 662,352 + Dshi_0658 0.74 -2.8 662,509 - Dshi_0658 0.84 -0.2 662,590 + Dshi_0658 0.89 -1.2 662,590 + Dshi_0658 0.89 -1.9 662,591 + Dshi_0658 0.89 -0.4 662,613 + -0.5 662,613 + -1.9 662,613 + -2.9 662,614 + -1.7 662,637 + -1.0 662,845 + -0.5 663,037 + -0.3 663,099 - Dshi_0659 0.11 -1.0 663,112 - Dshi_0659 0.12 -0.7 663,116 + Dshi_0659 0.12 +0.3 663,122 - Dshi_0659 0.13 -0.9 663,246 - Dshi_0659 0.22 -1.5 663,301 + Dshi_0659 0.26 -1.0 663,311 - Dshi_0659 0.27 -1.5 663,312 + Dshi_0659 0.27 +0.0 663,375 - Dshi_0659 0.31 +0.8 663,508 + Dshi_0659 0.41 +0.0 663,516 - Dshi_0659 0.42 -0.4 663,520 + Dshi_0659 0.42 -0.6 663,530 + Dshi_0659 0.43 +0.2
Or see this region's nucleotide sequence