Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2830

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,939,707	+		Ga0059261_2829	0.26	-0.1
2,939,707	+		Ga0059261_2829	0.26	+0.7
2,939,707	+		Ga0059261_2829	0.26	+1.1
2,939,707	+		Ga0059261_2829	0.26	-0.5
2,939,708	-		Ga0059261_2829	0.26	-0.3
2,939,708	-		Ga0059261_2829	0.26	+0.0
2,939,782	+		Ga0059261_2829	0.33	-0.8
2,939,782	+		Ga0059261_2829	0.33	-0.8
2,939,782	+		Ga0059261_2829	0.33	+0.3
2,939,782	+		Ga0059261_2829	0.33	+0.8
2,939,783	-		Ga0059261_2829	0.33	-0.4
2,939,783	-		Ga0059261_2829	0.33	+0.7
2,939,783	-		Ga0059261_2829	0.33	-0.2
2,940,391	+		Ga0059261_2829	0.88	-0.5
2,940,391	+				+1.2
2,940,391	+		Ga0059261_2829	0.88	-1.5
2,940,392	-		Ga0059261_2829	0.88	+0.1
2,940,392	-		Ga0059261_2829	0.88	+0.2
2,940,403	+		Ga0059261_2829	0.89	-0.1
2,940,403	+		Ga0059261_2829	0.89	-0.7
2,940,403	+		Ga0059261_2829	0.89	-0.5
2,940,403	+		Ga0059261_2829	0.89	-0.8
2,940,403	+		Ga0059261_2829	0.89	-0.1
2,940,404	-		Ga0059261_2829	0.89	+0.9
2,940,404	-		Ga0059261_2829	0.89	+0.8
2,940,404	-		Ga0059261_2829	0.89	+0.4
2,940,404	-		Ga0059261_2829	0.89	+0.1
2,940,404	-		Ga0059261_2829	0.89	-0.8
2,940,404	-		Ga0059261_2829	0.89	-0.0
2,940,471	+				+0.8
2,940,472	-				-0.6
2,940,472	-				+0.2
2,940,505	+				+0.9
2,940,505	+				+0.5
2,940,506	-				-0.5
2,940,506	-				-0.9
2,940,506	-				-0.2
2,940,506	-				+0.1
2,940,511	+				-0.4
2,940,511	+				+0.2
2,940,511	+				-0.9
2,940,511	+				-0.6
2,940,512	-				-0.4
2,940,512	-				-0.4
2,940,600	+				+0.1
2,940,601	-				+1.2
2,940,601	-				-0.1
2,940,601	-				+0.0
2,940,607	+				+0.1
2,940,607	+				-0.3
2,940,608	-				+0.9
2,940,608	-				+0.4
2,940,608	-				-0.6
2,940,608	-				-0.1
2,940,608	-				+0.6
2,940,608	-				-0.3
2,940,783	+		Ga0059261_2830	0.13	-0.5
2,940,783	+		Ga0059261_2830	0.13	+1.5
2,940,784	-		Ga0059261_2830	0.13	-0.2
2,940,784	-		Ga0059261_2830	0.13	-0.1
2,940,784	-		Ga0059261_2830	0.13	-0.1
2,940,899	+		Ga0059261_2830	0.26	-0.9
2,940,899	+		Ga0059261_2830	0.26	+0.2
2,940,923	+		Ga0059261_2830	0.29	+0.0
2,941,345	+		Ga0059261_2830	0.79	-0.9
2,941,346	-		Ga0059261_2830	0.79	+0.4
2,941,346	-		Ga0059261_2830	0.79	-0.7
2,941,628	+				+0.6
2,941,628	+				+0.1
2,941,628	+				-0.3
2,941,629	-				+2.2
2,941,629	-				-0.0
2,941,629	-				-0.8
2,941,629	-				-0.5
2,941,629	-				-0.0
2,941,742	+		Ga0059261_2831	0.17	+1.8
2,941,742	+		Ga0059261_2831	0.17	-0.9
2,941,742	+		Ga0059261_2831	0.17	+0.1
2,941,743	-		Ga0059261_2831	0.17	+0.9
2,941,757	+		Ga0059261_2831	0.18	-0.5
2,941,757	+		Ga0059261_2831	0.18	+0.2
2,941,758	-		Ga0059261_2831	0.18	+0.4
2,941,758	-		Ga0059261_2831	0.18	-0.3
2,941,758	-		Ga0059261_2831	0.18	-0.2
2,941,758	-		Ga0059261_2831	0.18	+0.2
2,941,758	-		Ga0059261_2831	0.18	+0.2
2,941,772	+		Ga0059261_2831	0.19	-0.6
2,941,772	+		Ga0059261_2831	0.19	+0.4
2,941,772	+		Ga0059261_2831	0.19	+0.1
2,941,773	-		Ga0059261_2831	0.19	-0.0
2,941,773	-		Ga0059261_2831	0.19	-0.7
2,941,786	-		Ga0059261_2831	0.20	-0.6
2,941,976	+		Ga0059261_2831	0.36	-0.6
2,941,976	+		Ga0059261_2831	0.36	-0.1
2,941,976	+		Ga0059261_2831	0.36	+0.5
2,941,977	-		Ga0059261_2831	0.36	-0.7
2,941,977	-		Ga0059261_2831	0.36	-0.7
2,941,977	-		Ga0059261_2831	0.36	+0.4
2,941,977	-		Ga0059261_2831	0.36	-0.7
2,942,070	+		Ga0059261_2831	0.43	+0.3
2,942,070	+		Ga0059261_2831	0.43	-0.2
2,942,071	-		Ga0059261_2831	0.43	-0.9
2,942,120	+		Ga0059261_2831	0.47	+0.9
2,942,120	+		Ga0059261_2831	0.47	+0.3
2,942,121	-		Ga0059261_2831	0.47	+0.3
2,942,231	-		Ga0059261_2831	0.56	-0.8
2,942,240	+		Ga0059261_2831	0.57	+0.0
2,942,240	+		Ga0059261_2831	0.57	+0.7
2,942,240	+		Ga0059261_2831	0.57	-0.0
2,942,240	+		Ga0059261_2831	0.57	-0.5
2,942,240	+		Ga0059261_2831	0.57	+0.2
2,942,240	+		Ga0059261_2831	0.57	-0.2
2,942,240	+		Ga0059261_2831	0.57	-0.2
2,942,241	-		Ga0059261_2831	0.57	-1.1
2,942,241	-		Ga0059261_2831	0.57	+0.3
2,942,241	-		Ga0059261_2831	0.57	+0.5
2,942,241	-		Ga0059261_2831	0.57	+0.6
2,942,384	-		Ga0059261_2831	0.68	+0.1
2,942,444	+		Ga0059261_2831	0.73	+0.6
2,942,444	+		Ga0059261_2831	0.73	+0.3
2,942,444	+		Ga0059261_2831	0.73	+0.2
2,942,445	-		Ga0059261_2831	0.73	-0.1
2,942,445	-		Ga0059261_2831	0.73	+0.9
2,942,445	-		Ga0059261_2831	0.73	+0.3
2,942,445	-		Ga0059261_2831	0.73	-0.1
2,942,445	-		Ga0059261_2831	0.73	-0.1
2,942,445	-		Ga0059261_2831	0.73	+0.2
2,942,445	-		Ga0059261_2831	0.73	+0.2