Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2138 and Ga0059261_2139 are separated by 247 nucleotides Ga0059261_2139 and Ga0059261_2140 are separated by 12 nucleotides
Ga0059261_2138: Ga0059261_2138 - transcriptional regulator, AraC family, at 2,251,201 to 2,252,013
_2138
Ga0059261_2139: Ga0059261_2139 - Siderophore-interacting FAD-binding domain, at 2,252,261 to 2,253,007
_2139
Ga0059261_2140: Ga0059261_2140 - polyribonucleotide nucleotidyltransferase, at 2,253,020 to 2,255,374
_2140
Position (kb)
2252
2253
2254 Strain fitness (log2 ratio)
-1
0
1 at 2251.295 kb on + strand, within Ga0059261_2138 at 2251.296 kb on - strand, within Ga0059261_2138 at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.432 kb on + strand at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.432 kb on + strand, within Ga0059261_2138 at 2251.433 kb on - strand, within Ga0059261_2138 at 2251.433 kb on - strand, within Ga0059261_2138 at 2251.433 kb on - strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.622 kb on + strand, within Ga0059261_2138 at 2251.623 kb on - strand, within Ga0059261_2138 at 2251.623 kb on - strand, within Ga0059261_2138 at 2251.623 kb on - strand, within Ga0059261_2138 at 2251.695 kb on + strand, within Ga0059261_2138 at 2251.695 kb on + strand, within Ga0059261_2138 at 2251.695 kb on + strand, within Ga0059261_2138 at 2251.739 kb on + strand, within Ga0059261_2138 at 2251.740 kb on - strand, within Ga0059261_2138 at 2251.740 kb on - strand, within Ga0059261_2138 at 2251.740 kb on - strand, within Ga0059261_2138 at 2251.963 kb on - strand at 2251.963 kb on - strand at 2252.013 kb on + strand at 2252.013 kb on + strand at 2252.014 kb on - strand at 2252.014 kb on - strand at 2252.014 kb on - strand at 2252.014 kb on - strand at 2252.049 kb on - strand at 2252.051 kb on + strand at 2252.051 kb on + strand at 2252.051 kb on + strand at 2252.052 kb on - strand at 2252.094 kb on + strand at 2252.094 kb on + strand at 2252.489 kb on + strand, within Ga0059261_2139 at 2252.489 kb on + strand, within Ga0059261_2139 at 2252.489 kb on + strand, within Ga0059261_2139 at 2252.489 kb on + strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.490 kb on - strand, within Ga0059261_2139 at 2252.693 kb on + strand, within Ga0059261_2139 at 2252.694 kb on - strand, within Ga0059261_2139 at 2252.888 kb on + strand, within Ga0059261_2139 at 2252.888 kb on + strand at 2252.888 kb on + strand, within Ga0059261_2139 at 2252.888 kb on + strand, within Ga0059261_2139 at 2252.889 kb on - strand, within Ga0059261_2139 at 2252.904 kb on + strand, within Ga0059261_2139 at 2252.904 kb on + strand, within Ga0059261_2139 at 2252.904 kb on + strand, within Ga0059261_2139 at 2252.904 kb on + strand, within Ga0059261_2139 at 2252.905 kb on - strand, within Ga0059261_2139 at 2252.905 kb on - strand, within Ga0059261_2139 at 2253.021 kb on + strand at 2253.021 kb on + strand at 2253.022 kb on - strand at 2253.022 kb on - strand at 2253.022 kb on - strand at 2253.022 kb on - strand at 2253.022 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,251,295 + Ga0059261_2138 0.12 +0.7 2,251,296 - Ga0059261_2138 0.12 +0.3 2,251,432 + Ga0059261_2138 0.28 +0.4 2,251,432 + Ga0059261_2138 0.28 +0.5 2,251,432 + +0.7 2,251,432 + Ga0059261_2138 0.28 +0.2 2,251,432 + Ga0059261_2138 0.28 +0.8 2,251,432 + Ga0059261_2138 0.28 +0.4 2,251,432 + Ga0059261_2138 0.28 +0.7 2,251,433 - Ga0059261_2138 0.29 +0.7 2,251,433 - Ga0059261_2138 0.29 +0.0 2,251,433 - Ga0059261_2138 0.29 +0.1 2,251,622 + Ga0059261_2138 0.52 -0.2 2,251,622 + Ga0059261_2138 0.52 +0.4 2,251,622 + Ga0059261_2138 0.52 +0.0 2,251,622 + Ga0059261_2138 0.52 +0.6 2,251,622 + Ga0059261_2138 0.52 +0.2 2,251,622 + Ga0059261_2138 0.52 +1.3 2,251,623 - Ga0059261_2138 0.52 +0.9 2,251,623 - Ga0059261_2138 0.52 +0.4 2,251,623 - Ga0059261_2138 0.52 -0.1 2,251,695 + Ga0059261_2138 0.61 -0.3 2,251,695 + Ga0059261_2138 0.61 +0.3 2,251,695 + Ga0059261_2138 0.61 +0.6 2,251,739 + Ga0059261_2138 0.66 +0.5 2,251,740 - Ga0059261_2138 0.66 -0.4 2,251,740 - Ga0059261_2138 0.66 -0.5 2,251,740 - Ga0059261_2138 0.66 +0.8 2,251,963 - +0.9 2,251,963 - -0.5 2,252,013 + +0.1 2,252,013 + -0.4 2,252,014 - +0.7 2,252,014 - -0.6 2,252,014 - +0.9 2,252,014 - +0.6 2,252,049 - +0.3 2,252,051 + +0.6 2,252,051 + +0.0 2,252,051 + -0.3 2,252,052 - -0.0 2,252,094 + -0.3 2,252,094 + +1.1 2,252,489 + Ga0059261_2139 0.31 +0.2 2,252,489 + Ga0059261_2139 0.31 -0.0 2,252,489 + Ga0059261_2139 0.31 +0.3 2,252,489 + Ga0059261_2139 0.31 +0.3 2,252,490 - Ga0059261_2139 0.31 +0.2 2,252,490 - Ga0059261_2139 0.31 +0.5 2,252,490 - Ga0059261_2139 0.31 +0.9 2,252,490 - Ga0059261_2139 0.31 +1.2 2,252,490 - Ga0059261_2139 0.31 +0.2 2,252,490 - Ga0059261_2139 0.31 +0.5 2,252,490 - Ga0059261_2139 0.31 +0.8 2,252,490 - Ga0059261_2139 0.31 -0.2 2,252,693 + Ga0059261_2139 0.58 -0.3 2,252,694 - Ga0059261_2139 0.58 +0.3 2,252,888 + Ga0059261_2139 0.84 +0.1 2,252,888 + +1.3 2,252,888 + Ga0059261_2139 0.84 +1.0 2,252,888 + Ga0059261_2139 0.84 -0.4 2,252,889 - Ga0059261_2139 0.84 +0.1 2,252,904 + Ga0059261_2139 0.86 -0.1 2,252,904 + Ga0059261_2139 0.86 +0.3 2,252,904 + Ga0059261_2139 0.86 +0.0 2,252,904 + Ga0059261_2139 0.86 -0.3 2,252,905 - Ga0059261_2139 0.86 +0.9 2,252,905 - Ga0059261_2139 0.86 +0.4 2,253,021 + +0.2 2,253,021 + +1.6 2,253,022 - +0.2 2,253,022 - +1.3 2,253,022 - -0.1 2,253,022 - -0.9 2,253,022 - +0.3
Or see this region's nucleotide sequence