Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1223

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,279,528	-				+0.1
1,279,577	+				+0.5
1,279,577	+				-0.2
1,279,577	+				+0.2
1,279,578	-				-0.6
1,279,578	-				-0.1
1,279,578	-				-0.7
1,279,597	+				+0.4
1,279,597	+				-0.3
1,279,598	-				+0.2
1,279,598	-				+0.0
1,279,598	-				+0.1
1,279,610	+				+0.0
1,279,611	-				+0.6
1,279,720	-				-0.4
1,279,720	-				-0.5
1,279,769	+				+0.1
1,279,769	+				+0.2
1,279,784	-				+0.1
1,279,820	+				+0.7
1,279,820	+				+0.2
1,279,821	-				+0.1
1,279,821	-				-0.4
1,279,837	-				-0.1
1,279,940	+				+0.3
1,279,940	+				+0.3
1,279,940	+				+0.3
1,279,940	+				-1.5
1,279,940	+				+1.1
1,279,941	-				+0.2
1,279,993	+				+0.1
1,280,022	+		Ga0059261_1223	0.12	-0.8
1,280,022	+		Ga0059261_1223	0.12	-0.0
1,280,022	+		Ga0059261_1223	0.12	-0.2
1,280,022	+		Ga0059261_1223	0.12	-0.6
1,280,022	+		Ga0059261_1223	0.12	+0.0
1,280,022	+		Ga0059261_1223	0.12	-0.4
1,280,022	+		Ga0059261_1223	0.12	-0.2
1,280,022	+		Ga0059261_1223	0.12	+0.3
1,280,022	+		Ga0059261_1223	0.12	-0.5
1,280,022	+		Ga0059261_1223	0.12	+0.3
1,280,023	-		Ga0059261_1223	0.12	+0.0
1,280,023	-		Ga0059261_1223	0.12	-0.3
1,280,023	-		Ga0059261_1223	0.12	-1.1
1,280,023	-		Ga0059261_1223	0.12	-0.4
1,280,023	-		Ga0059261_1223	0.12	+0.2
1,280,023	-		Ga0059261_1223	0.12	-0.6
1,280,023	-		Ga0059261_1223	0.12	-0.8
1,280,057	+		Ga0059261_1223	0.14	-0.2
1,280,057	+		Ga0059261_1223	0.14	+0.3
1,280,057	+		Ga0059261_1223	0.14	-0.0
1,280,057	+		Ga0059261_1223	0.14	-0.4
1,280,057	+		Ga0059261_1223	0.14	-1.4
1,280,057	+		Ga0059261_1223	0.14	+0.1
1,280,057	+		Ga0059261_1223	0.14	+0.3
1,280,057	+		Ga0059261_1223	0.14	-0.3
1,280,058	-				+1.1
1,280,058	-				+1.1
1,280,058	-		Ga0059261_1223	0.14	+0.3
1,280,058	-				-0.9
1,280,058	-		Ga0059261_1223	0.14	-0.9
1,280,058	-		Ga0059261_1223	0.14	+0.5
1,280,058	-		Ga0059261_1223	0.14	+0.0
1,280,058	-		Ga0059261_1223	0.14	+0.2
1,280,058	-		Ga0059261_1223	0.14	-2.2
1,280,058	-		Ga0059261_1223	0.14	-0.6
1,280,188	+		Ga0059261_1223	0.22	+0.6
1,280,188	+		Ga0059261_1223	0.22	-0.5
1,280,188	+		Ga0059261_1223	0.22	-1.1
1,280,188	+		Ga0059261_1223	0.22	-0.6
1,280,188	+		Ga0059261_1223	0.22	-0.4
1,280,188	+		Ga0059261_1223	0.22	+0.1
1,280,188	+		Ga0059261_1223	0.22	-0.3
1,280,189	-		Ga0059261_1223	0.22	-0.5
1,280,189	-		Ga0059261_1223	0.22	+1.3
1,280,189	-		Ga0059261_1223	0.22	-0.2
1,280,189	-		Ga0059261_1223	0.22	+0.3
1,280,189	-		Ga0059261_1223	0.22	-1.0
1,280,189	-		Ga0059261_1223	0.22	-0.9
1,280,189	-		Ga0059261_1223	0.22	+0.4
1,280,189	-		Ga0059261_1223	0.22	-0.4
1,280,190	+		Ga0059261_1223	0.22	-0.0
1,280,190	+				-0.9
1,280,190	+		Ga0059261_1223	0.22	-0.5
1,280,190	+		Ga0059261_1223	0.22	-0.1
1,280,190	+		Ga0059261_1223	0.22	-0.5
1,280,190	+		Ga0059261_1223	0.22	+0.1
1,280,191	-		Ga0059261_1223	0.22	+1.4
1,280,191	-		Ga0059261_1223	0.22	+0.6
1,280,191	-		Ga0059261_1223	0.22	+0.5
1,280,191	-		Ga0059261_1223	0.22	+0.2
1,280,228	-		Ga0059261_1223	0.25	-0.3
1,280,228	-		Ga0059261_1223	0.25	+3.4
1,280,236	+		Ga0059261_1223	0.25	-1.7
1,280,236	+		Ga0059261_1223	0.25	-0.4
1,280,236	+		Ga0059261_1223	0.25	+1.1
1,280,236	+		Ga0059261_1223	0.25	-0.8
1,280,236	+		Ga0059261_1223	0.25	+0.8
1,280,237	-		Ga0059261_1223	0.25	-0.6
1,280,277	+		Ga0059261_1223	0.28	-1.1
1,280,277	+		Ga0059261_1223	0.28	+0.9
1,280,278	-		Ga0059261_1223	0.28	-0.4
1,280,278	-		Ga0059261_1223	0.28	-0.3
1,280,278	-		Ga0059261_1223	0.28	-0.3
1,280,278	-		Ga0059261_1223	0.28	-0.1
1,280,631	+		Ga0059261_1223	0.50	-0.6
1,280,631	+		Ga0059261_1223	0.50	+0.5
1,280,631	+		Ga0059261_1223	0.50	-1.7
1,280,632	-		Ga0059261_1223	0.50	-0.4
1,280,632	-		Ga0059261_1223	0.50	-0.1
1,280,632	-		Ga0059261_1223	0.50	+0.6
1,280,701	-		Ga0059261_1223	0.55	-0.3
1,280,701	-		Ga0059261_1223	0.55	+0.6
1,280,774	-		Ga0059261_1223	0.59	+0.3
1,280,774	-		Ga0059261_1223	0.59	-0.7
1,280,774	-		Ga0059261_1223	0.59	-0.1
1,280,781	+		Ga0059261_1223	0.60	-0.6
1,280,781	+		Ga0059261_1223	0.60	-0.2
1,280,782	-		Ga0059261_1223	0.60	+0.4
1,280,782	-		Ga0059261_1223	0.60	-0.2
1,280,782	-		Ga0059261_1223	0.60	-0.1
1,280,782	-		Ga0059261_1223	0.60	-0.1
1,280,782	-		Ga0059261_1223	0.60	-0.2
1,280,782	-		Ga0059261_1223	0.60	-0.6
1,281,005	+		Ga0059261_1223	0.74	-0.1
1,281,005	+		Ga0059261_1223	0.74	-0.1
1,281,005	+		Ga0059261_1223	0.74	+0.3
1,281,006	-		Ga0059261_1223	0.74	-0.1
1,281,018	+		Ga0059261_1223	0.75	+0.3
1,281,018	+		Ga0059261_1223	0.75	+0.2
1,281,018	+		Ga0059261_1223	0.75	-0.3
1,281,018	+		Ga0059261_1223	0.75	+0.5
1,281,018	+		Ga0059261_1223	0.75	-2.2
1,281,019	-		Ga0059261_1223	0.75	-0.6
1,281,019	-		Ga0059261_1223	0.75	+0.2
1,281,019	-		Ga0059261_1223	0.75	+0.3
1,281,107	+		Ga0059261_1223	0.80	-0.1
1,281,107	+		Ga0059261_1223	0.80	+0.1
1,281,108	-		Ga0059261_1223	0.80	+0.6
1,281,108	-		Ga0059261_1223	0.80	+0.8
1,281,108	-		Ga0059261_1223	0.80	+0.1
1,281,108	-		Ga0059261_1223	0.80	-0.8
1,281,119	-		Ga0059261_1223	0.81	-0.2
1,281,131	+		Ga0059261_1223	0.82	-0.2
1,281,224	+		Ga0059261_1223	0.88	-0.9
1,281,224	+		Ga0059261_1223	0.88	-0.0
1,281,224	+		Ga0059261_1223	0.88	-0.3
1,281,224	+		Ga0059261_1223	0.88	+0.3
1,281,224	+		Ga0059261_1223	0.88	+0.8
1,281,225	-		Ga0059261_1223	0.88	-0.5
1,281,225	-		Ga0059261_1223	0.88	+0.4
1,281,225	-		Ga0059261_1223	0.88	+1.7
1,281,226	+		Ga0059261_1223	0.88	-0.3
1,281,227	-		Ga0059261_1223	0.88	+0.1
1,281,227	-		Ga0059261_1223	0.88	+0.2
1,281,314	-				-0.6
1,281,314	-				-0.2
1,281,356	+				-0.6
1,281,357	-				-0.8
1,281,357	-				-1.1
1,281,357	-				-0.1
1,281,397	+				+0.3
1,281,427	+				+0.6
1,281,427	+				-0.5
1,281,428	-				+0.8
1,281,466	-				-0.2
1,281,539	+		Ga0059261_1224	0.24	+0.7
1,281,722	+				+2.1
1,281,723	-		Ga0059261_1224	0.63	-0.2
1,281,723	-		Ga0059261_1224	0.63	-1.0
1,281,802	+		Ga0059261_1224	0.80	-1.2
1,281,802	+		Ga0059261_1224	0.80	+1.3
1,281,802	+		Ga0059261_1224	0.80	+0.8
1,281,802	+		Ga0059261_1224	0.80	-0.1
1,281,803	-				-0.5
1,281,803	-		Ga0059261_1224	0.80	+0.0
1,281,803	-		Ga0059261_1224	0.80	+0.6
1,281,803	-		Ga0059261_1224	0.80	-0.5
1,281,803	-		Ga0059261_1224	0.80	-0.1
1,281,803	-		Ga0059261_1224	0.80	-1.1
1,281,803	-		Ga0059261_1224	0.80	+0.1
1,281,826	-		Ga0059261_1224	0.85	-0.2
1,281,836	+		Ga0059261_1224	0.87	-0.6
1,281,836	+		Ga0059261_1224	0.87	-0.4
1,281,836	+		Ga0059261_1224	0.87	+0.3
1,281,836	+		Ga0059261_1224	0.87	-0.0
1,281,837	-		Ga0059261_1224	0.87	+0.0
1,281,837	-				+1.1
1,281,837	-		Ga0059261_1224	0.87	-0.0
1,281,841	+		Ga0059261_1224	0.88	+1.3
1,281,841	+		Ga0059261_1224	0.88	-0.2
1,281,841	+		Ga0059261_1224	0.88	-0.7
1,281,841	+		Ga0059261_1224	0.88	-0.9
1,281,841	+		Ga0059261_1224	0.88	+0.8
1,281,842	-		Ga0059261_1224	0.88	+0.7
1,281,842	-		Ga0059261_1224	0.88	-0.7
1,281,842	-		Ga0059261_1224	0.88	-0.3
1,281,899	+				-0.8
1,281,899	+				+0.6
1,281,899	+				-1.3
1,281,899	+				+0.1
1,281,900	-				+0.4
1,281,900	-				-0.2
1,281,917	+				+0.6
1,281,918	-				+0.0
1,281,918	-				-0.0
1,281,918	-				+0.3
1,281,918	-				-0.2
1,281,963	+				-0.3
1,281,964	-				-0.4
1,281,973	+				-0.5
1,281,974	-				-0.7
1,281,974	-				+0.4
1,281,976	+				+0.8
1,281,976	+				+0.3
1,281,976	+				-0.3
1,281,976	+				-1.0
1,281,977	-				+0.1
1,281,995	-				+0.0
1,281,995	-				-0.5
1,282,019	+				-0.2
1,282,020	-				-0.1
1,282,020	-				+0.1
1,282,020	-				-0.5
1,282,052	-				+0.1
1,282,125	+				-1.0
1,282,126	-				+0.4
1,282,126	-				-0.1
1,282,170	-		Ga0059261_1225	0.11	-0.0
1,282,172	+		Ga0059261_1225	0.11	+0.0
1,282,182	+		Ga0059261_1225	0.12	-1.8
1,282,182	+		Ga0059261_1225	0.12	+0.1
1,282,182	+		Ga0059261_1225	0.12	+0.4
1,282,183	-		Ga0059261_1225	0.12	-0.3
1,282,183	-		Ga0059261_1225	0.12	+0.4
1,282,183	-		Ga0059261_1225	0.12	-0.1
1,282,183	-		Ga0059261_1225	0.12	+0.3
1,282,183	-		Ga0059261_1225	0.12	-0.7
1,282,183	-		Ga0059261_1225	0.12	+0.3
1,282,183	-		Ga0059261_1225	0.12	-1.7
1,282,188	-		Ga0059261_1225	0.13	-0.6
1,282,196	+		Ga0059261_1225	0.14	-0.4
1,282,196	+		Ga0059261_1225	0.14	-0.8
1,282,196	+		Ga0059261_1225	0.14	+0.7
1,282,196	+		Ga0059261_1225	0.14	-0.1
1,282,196	+		Ga0059261_1225	0.14	+0.3
1,282,196	+		Ga0059261_1225	0.14	-0.5
1,282,196	+		Ga0059261_1225	0.14	+0.1
1,282,196	+		Ga0059261_1225	0.14	+0.5
1,282,196	+		Ga0059261_1225	0.14	+0.3
1,282,196	+				+0.5
1,282,196	+				+0.7
1,282,196	+		Ga0059261_1225	0.14	-1.2
1,282,197	-		Ga0059261_1225	0.14	-0.7
1,282,197	-		Ga0059261_1225	0.14	-0.1
1,282,197	-		Ga0059261_1225	0.14	-0.3
1,282,197	-		Ga0059261_1225	0.14	-0.4
1,282,197	-		Ga0059261_1225	0.14	-0.9
1,282,197	-		Ga0059261_1225	0.14	+0.4
1,282,197	-		Ga0059261_1225	0.14	-0.5
1,282,197	-		Ga0059261_1225	0.14	-0.9
1,282,197	-		Ga0059261_1225	0.14	-0.7
1,282,220	+		Ga0059261_1225	0.16	-0.5
1,282,220	+		Ga0059261_1225	0.16	+0.3
1,282,221	-		Ga0059261_1225	0.16	-0.5
1,282,221	-		Ga0059261_1225	0.16	+0.1
1,282,221	-		Ga0059261_1225	0.16	-0.1
1,282,221	-		Ga0059261_1225	0.16	-1.9
1,282,243	+		Ga0059261_1225	0.18	+0.2
1,282,244	-		Ga0059261_1225	0.18	-0.9
1,282,265	+		Ga0059261_1225	0.20	+0.7
1,282,265	+		Ga0059261_1225	0.20	-0.4
1,282,266	-		Ga0059261_1225	0.20	+0.0
1,282,323	+		Ga0059261_1225	0.25	+0.4
1,282,323	+		Ga0059261_1225	0.25	+0.0
1,282,323	+		Ga0059261_1225	0.25	+1.2
1,282,323	+		Ga0059261_1225	0.25	+0.3
1,282,324	-		Ga0059261_1225	0.25	-0.1
1,282,324	-		Ga0059261_1225	0.25	+0.0
1,282,324	-		Ga0059261_1225	0.25	-0.0
1,282,324	-		Ga0059261_1225	0.25	+0.4
1,282,344	-		Ga0059261_1225	0.27	+0.0
1,282,419	+		Ga0059261_1225	0.33	-0.1
1,282,419	+		Ga0059261_1225	0.33	-0.3
1,282,419	+		Ga0059261_1225	0.33	+0.3
1,282,419	+		Ga0059261_1225	0.33	-0.4
1,282,420	-		Ga0059261_1225	0.33	+0.1
1,282,420	-		Ga0059261_1225	0.33	-0.4
1,282,420	-		Ga0059261_1225	0.33	-0.8
1,282,420	-		Ga0059261_1225	0.33	-0.4
1,282,420	-		Ga0059261_1225	0.33	+0.3
1,282,420	-		Ga0059261_1225	0.33	-1.8