Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21930

Experiment: D-Serine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21925 and BWI76_RS21930 are separated by 134 nucleotidesBWI76_RS21930 and BWI76_RS21935 overlap by 4 nucleotides BWI76_RS21925: BWI76_RS21925 - agmatinase, at 4,580,304 to 4,581,275 _RS21925 BWI76_RS21930: BWI76_RS21930 - LysR family transcriptional regulator, at 4,581,410 to 4,582,312 _RS21930 BWI76_RS21935: BWI76_RS21935 - MFS transporter, at 4,582,309 to 4,583,502 _RS21935 Position (kb) 4581 4582 4583Strain fitness (log2 ratio) -1 0 1 2 3at 4580.595 kb on + strand, within BWI76_RS21925at 4580.630 kb on + strand, within BWI76_RS21925at 4580.673 kb on + strand, within BWI76_RS21925at 4580.673 kb on - strand, within BWI76_RS21925at 4580.998 kb on + strand, within BWI76_RS21925at 4581.154 kb on + strand, within BWI76_RS21925at 4581.159 kb on + strand, within BWI76_RS21925at 4581.167 kb on - strand, within BWI76_RS21925at 4581.284 kb on + strandat 4581.284 kb on + strandat 4581.284 kb on + strandat 4581.292 kb on - strandat 4581.404 kb on - strandat 4581.483 kb on - strandat 4581.506 kb on - strand, within BWI76_RS21930at 4581.723 kb on + strand, within BWI76_RS21930at 4581.811 kb on + strandat 4581.947 kb on + strand, within BWI76_RS21930at 4582.053 kb on + strand, within BWI76_RS21930at 4582.101 kb on + strand, within BWI76_RS21930at 4582.148 kb on + strand, within BWI76_RS21930at 4582.175 kb on - strand, within BWI76_RS21930at 4582.253 kb on + strandat 4582.280 kb on - strandat 4582.771 kb on - strand, within BWI76_RS21935at 4582.831 kb on + strand, within BWI76_RS21935at 4582.831 kb on + strand, within BWI76_RS21935at 4582.986 kb on - strand, within BWI76_RS21935at 4583.084 kb on + strand, within BWI76_RS21935at 4583.227 kb on + strand, within BWI76_RS21935

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Serine (C)
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4,580,595 + BWI76_RS21925 0.30 +0.9
4,580,630 + BWI76_RS21925 0.34 -0.5
4,580,673 + BWI76_RS21925 0.38 -0.7
4,580,673 - BWI76_RS21925 0.38 +0.3
4,580,998 + BWI76_RS21925 0.71 -0.5
4,581,154 + BWI76_RS21925 0.87 +1.0
4,581,159 + BWI76_RS21925 0.88 +1.6
4,581,167 - BWI76_RS21925 0.89 +0.1
4,581,284 + -1.2
4,581,284 + +1.0
4,581,284 + -1.1
4,581,292 - +0.2
4,581,404 - +0.8
4,581,483 - -1.5
4,581,506 - BWI76_RS21930 0.11 -0.1
4,581,723 + BWI76_RS21930 0.35 +1.0
4,581,811 + +3.2
4,581,947 + BWI76_RS21930 0.59 -0.6
4,582,053 + BWI76_RS21930 0.71 -0.2
4,582,101 + BWI76_RS21930 0.77 +0.4
4,582,148 + BWI76_RS21930 0.82 -0.1
4,582,175 - BWI76_RS21930 0.85 +0.0
4,582,253 + +0.6
4,582,280 - +0.3
4,582,771 - BWI76_RS21935 0.39 +0.8
4,582,831 + BWI76_RS21935 0.44 -0.1
4,582,831 + BWI76_RS21935 0.44 -0.6
4,582,986 - BWI76_RS21935 0.57 +1.0
4,583,084 + BWI76_RS21935 0.65 -0.1
4,583,227 + BWI76_RS21935 0.77 +0.4

Or see this region's nucleotide sequence