Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_15835

Experiment: 1-ethyl-3-methylimidazolium acetate 10 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_15830 and AO356_15835 are separated by 129 nucleotidesAO356_15835 and AO356_15840 are separated by 13 nucleotides AO356_15830: AO356_15830 - hypothetical protein, at 3,584,585 to 3,586,123 _15830 AO356_15835: AO356_15835 - FMN adenylyltransferase, at 3,586,253 to 3,587,191 _15835 AO356_15840: AO356_15840 - isoleucine--tRNA ligase, at 3,587,205 to 3,590,036 _15840 Position (kb) 3586 3587 3588Strain fitness (log2 ratio) -1 0 1at 3586.219 kb on + strandat 3586.219 kb on + strandat 3586.221 kb on + strandat 3586.234 kb on + strandat 3586.234 kb on + strandat 3586.234 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium acetate 10 mM
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3,586,219 + -0.1
3,586,219 + +1.3
3,586,221 + -0.5
3,586,234 + +1.1
3,586,234 + +1.0
3,586,234 + +1.0

Or see this region's nucleotide sequence