Strain Fitness in Shewanella loihica PV-4 around Shew_2714

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,211,089	+		Shew_2713	0.44	+0.5
3,211,314	+		Shew_2713	0.64	+0.1
3,211,316	+		Shew_2713	0.64	+0.3
3,211,316	+		Shew_2713	0.64	+0.1
3,211,324	-		Shew_2713	0.65	+0.0
3,211,324	-		Shew_2713	0.65	+0.1
3,211,324	-		Shew_2713	0.65	+0.1
3,211,324	-		Shew_2713	0.65	+0.2
3,211,411	-		Shew_2713	0.73	+0.0
3,211,432	+		Shew_2713	0.75	+0.3
3,211,680	-				-0.1
3,211,687	-				+0.5
3,211,762	+				+0.0
3,211,774	+				+0.1
3,211,943	+				+0.2
3,212,041	+				+0.2
3,212,041	+				+0.3
3,212,049	-				-0.2
3,212,169	+		Shew_2714	0.20	+0.6
3,212,169	+		Shew_2714	0.20	+0.3
3,212,171	-		Shew_2714	0.20	+0.3
3,212,314	+		Shew_2714	0.39	+0.1
3,212,316	+		Shew_2714	0.39	+0.7
3,212,553	-		Shew_2714	0.71	+0.7
3,212,553	-		Shew_2714	0.71	+0.1
3,212,832	+				+0.1
3,213,032	+				+0.1
3,213,272	+				+0.2
3,213,280	-				-0.2
3,213,441	-		Shew_2715	0.31	-0.7