Strain Fitness in Shewanella loihica PV-4 around Shew_1502

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,721,587	-		Shew_1500	0.42	+0.6
1,721,721	-		Shew_1500	0.75	+0.6
1,722,563	+				-0.3
1,723,016	-		Shew_1502	0.16	-0.2
1,723,016	-		Shew_1502	0.16	-0.5
1,723,245	+		Shew_1502	0.23	-0.5
1,723,253	-		Shew_1502	0.23	-0.1
1,723,655	-		Shew_1502	0.35	-0.4
1,723,655	-		Shew_1502	0.35	-0.4
1,724,257	-		Shew_1502	0.53	-0.4
1,724,295	-		Shew_1502	0.54	-0.7
1,724,594	+		Shew_1502	0.63	+0.0
1,725,425	-		Shew_1502	0.88	+0.1
1,725,501	-				-0.4
1,725,892	+				-0.1
1,726,012	+				+0.4
1,726,067	-				+0.1
1,726,067	-				+0.2
1,726,183	+		Shew_1503	0.18	-0.0