Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3944
Experiment: Doxycycline hyclate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,059,958 | + | Ga0059261_3943 | 0.50 | +1.1 | |
4,060,260 | + | Ga0059261_3944 | 0.17 | +0.1 | |
4,060,260 | + | Ga0059261_3944 | 0.17 | +0.5 | |
4,060,260 | + | Ga0059261_3944 | 0.17 | +0.1 | |
4,060,260 | + | Ga0059261_3944 | 0.17 | +0.1 | |
4,060,349 | + | Ga0059261_3944 | 0.36 | +0.0 | |
4,060,349 | + | Ga0059261_3944 | 0.36 | +0.9 | |
4,060,349 | + | Ga0059261_3944 | 0.36 | +0.9 | |
4,060,349 | + | Ga0059261_3944 | 0.36 | +0.5 | |
4,060,349 | + | Ga0059261_3944 | 0.36 | +0.3 | |
4,060,350 | - | Ga0059261_3944 | 0.37 | -0.9 | |
4,060,350 | - | Ga0059261_3944 | 0.37 | +1.1 | |
4,060,733 | + | -0.1 | |||
4,060,733 | + | -0.4 | |||
4,060,733 | + | +0.3 | |||
4,060,733 | + | -0.4 | |||
4,060,733 | + | +2.4 | |||
4,060,734 | - | +1.1 | |||
4,060,734 | - | -0.4 | |||
4,060,734 | - | +0.5 | |||
4,060,734 | - | -0.4 | |||
4,060,806 | + | -0.5 | |||
4,060,806 | + | +0.1 | |||
4,060,806 | + | +2.7 | |||
4,060,807 | - | -0.9 | |||
4,060,898 | + | Ga0059261_3945 | 0.13 | -0.2 | |
4,060,899 | - | Ga0059261_3945 | 0.13 | -0.2 | |
4,060,899 | - | +1.1 | |||
4,061,123 | + | Ga0059261_3945 | 0.24 | +0.8 | |
4,061,123 | + | Ga0059261_3945 | 0.24 | +0.1 | |
4,061,123 | + | Ga0059261_3945 | 0.24 | +0.7 | |
4,061,308 | - | Ga0059261_3945 | 0.33 | +0.3 |
Or see this region's nucleotide sequence