Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3941

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,055,633	+		Ga0059261_3939	0.26	-0.1
4,055,633	+		Ga0059261_3939	0.26	+1.5
4,055,634	-		Ga0059261_3939	0.26	+1.7
4,055,634	-		Ga0059261_3939	0.26	+0.6
4,055,641	+		Ga0059261_3939	0.27	+1.2
4,055,641	+		Ga0059261_3939	0.27	+0.7
4,055,642	-		Ga0059261_3939	0.27	+1.5
4,055,767	+		Ga0059261_3939	0.46	+1.4
4,055,768	-		Ga0059261_3939	0.46	-0.3
4,055,768	-		Ga0059261_3939	0.46	+0.1
4,055,768	-		Ga0059261_3939	0.46	-0.0
4,055,808	+		Ga0059261_3939	0.53	+0.7
4,055,923	+		Ga0059261_3939	0.70	+1.0
4,056,276	+		Ga0059261_3940	0.35	+0.9
4,056,276	+		Ga0059261_3940	0.35	+1.0
4,056,276	+		Ga0059261_3940	0.35	+1.6
4,056,276	+		Ga0059261_3940	0.35	+0.2
4,056,276	+		Ga0059261_3940	0.35	+0.8
4,056,276	+		Ga0059261_3940	0.35	+0.7
4,056,276	+		Ga0059261_3940	0.35	+2.1
4,056,276	+		Ga0059261_3940	0.35	+1.7
4,056,276	+		Ga0059261_3940	0.35	-0.9
4,056,277	-		Ga0059261_3940	0.36	+1.7
4,056,277	-		Ga0059261_3940	0.36	+1.1
4,056,277	-		Ga0059261_3940	0.36	+0.5
4,056,277	-		Ga0059261_3940	0.36	+0.1
4,056,277	-		Ga0059261_3940	0.36	+0.6
4,056,277	-		Ga0059261_3940	0.36	+1.6
4,056,277	-		Ga0059261_3940	0.36	+0.1
4,056,383	+		Ga0059261_3940	0.66	+1.1
4,056,383	+		Ga0059261_3940	0.66	-0.6
4,056,383	+		Ga0059261_3940	0.66	+0.2
4,056,420	+		Ga0059261_3940	0.77	+0.9
4,056,420	+		Ga0059261_3940	0.77	-0.1
4,056,420	+		Ga0059261_3940	0.77	+0.7
4,056,421	-		Ga0059261_3940	0.77	+1.7
4,056,421	-		Ga0059261_3940	0.77	+0.9
4,056,421	-		Ga0059261_3940	0.77	+0.9
4,056,421	-		Ga0059261_3940	0.77	+0.8
4,056,421	-		Ga0059261_3940	0.77	+1.0
4,057,104	+		Ga0059261_3941	0.22	+1.5
4,057,104	+		Ga0059261_3941	0.22	-0.2
4,057,104	+		Ga0059261_3941	0.22	+0.5
4,057,104	+		Ga0059261_3941	0.22	+0.2
4,057,104	+		Ga0059261_3941	0.22	+0.7
4,057,104	+		Ga0059261_3941	0.22	+1.5
4,057,104	+		Ga0059261_3941	0.22	+0.0
4,057,104	+		Ga0059261_3941	0.22	+1.3
4,057,104	+		Ga0059261_3941	0.22	+0.8
4,057,104	+		Ga0059261_3941	0.22	+1.2
4,057,105	-		Ga0059261_3941	0.22	+0.1
4,057,105	-				+0.1
4,057,105	-		Ga0059261_3941	0.22	+0.4
4,057,105	-		Ga0059261_3941	0.22	+1.6
4,057,105	-		Ga0059261_3941	0.22	+1.4
4,057,105	-		Ga0059261_3941	0.22	+0.9
4,057,105	-		Ga0059261_3941	0.22	+1.1
4,057,105	-		Ga0059261_3941	0.22	+0.9
4,057,105	-		Ga0059261_3941	0.22	-0.0
4,057,105	-		Ga0059261_3941	0.22	+0.3
4,057,105	-		Ga0059261_3941	0.22	+0.5
4,057,108	+		Ga0059261_3941	0.22	+0.1
4,057,108	+		Ga0059261_3941	0.22	+0.7
4,057,109	-		Ga0059261_3941	0.22	+0.7
4,057,109	-		Ga0059261_3941	0.22	-0.0
4,057,109	-		Ga0059261_3941	0.22	+1.5
4,057,109	-		Ga0059261_3941	0.22	+0.4
4,057,109	-		Ga0059261_3941	0.22	+0.5
4,057,109	-		Ga0059261_3941	0.22	+0.5
4,057,219	+		Ga0059261_3941	0.26	+0.9
4,057,219	+		Ga0059261_3941	0.26	+1.4
4,057,220	-		Ga0059261_3941	0.27	-0.9
4,057,220	-		Ga0059261_3941	0.27	-0.2
4,057,220	-		Ga0059261_3941	0.27	+1.3
4,057,220	-		Ga0059261_3941	0.27	+0.7
4,057,220	-		Ga0059261_3941	0.27	+0.6
4,057,221	+		Ga0059261_3941	0.27	+0.6
4,057,221	+		Ga0059261_3941	0.27	+0.6
4,057,221	+		Ga0059261_3941	0.27	-0.1
4,057,221	+		Ga0059261_3941	0.27	+1.1
4,057,222	-		Ga0059261_3941	0.27	-0.2
4,057,222	-		Ga0059261_3941	0.27	+0.7
4,057,222	-		Ga0059261_3941	0.27	+0.4
4,057,222	-		Ga0059261_3941	0.27	+1.1
4,057,222	-		Ga0059261_3941	0.27	+0.7
4,057,222	-		Ga0059261_3941	0.27	+0.4
4,057,222	-		Ga0059261_3941	0.27	+0.1
4,057,222	-		Ga0059261_3941	0.27	+0.5
4,057,293	+		Ga0059261_3941	0.29	+1.0
4,057,293	+		Ga0059261_3941	0.29	+0.4
4,057,293	+		Ga0059261_3941	0.29	+0.6
4,057,293	+		Ga0059261_3941	0.29	+1.1
4,057,293	+		Ga0059261_3941	0.29	+0.6
4,057,293	+		Ga0059261_3941	0.29	+0.9
4,057,294	-		Ga0059261_3941	0.29	-0.2
4,057,294	-		Ga0059261_3941	0.29	+1.0
4,057,413	+		Ga0059261_3941	0.34	-0.2
4,057,413	+		Ga0059261_3941	0.34	+0.5
4,057,413	+		Ga0059261_3941	0.34	-0.9
4,057,413	+		Ga0059261_3941	0.34	+1.6
4,057,413	+		Ga0059261_3941	0.34	-0.5
4,057,413	+		Ga0059261_3941	0.34	+0.9
4,057,413	+		Ga0059261_3941	0.34	-0.2
4,057,413	+		Ga0059261_3941	0.34	+0.2
4,057,413	+		Ga0059261_3941	0.34	+0.7
4,057,413	+		Ga0059261_3941	0.34	+0.3
4,057,413	+		Ga0059261_3941	0.34	+2.4
4,057,413	+		Ga0059261_3941	0.34	+1.6
4,057,414	-		Ga0059261_3941	0.34	-0.1
4,057,414	-				+3.1
4,057,414	-		Ga0059261_3941	0.34	+0.0
4,057,414	-		Ga0059261_3941	0.34	+0.7
4,057,509	+		Ga0059261_3941	0.38	+1.1
4,057,509	+		Ga0059261_3941	0.38	+0.9
4,057,509	+		Ga0059261_3941	0.38	+0.6
4,057,509	+		Ga0059261_3941	0.38	+1.2
4,057,510	-		Ga0059261_3941	0.38	+1.1
4,057,510	-		Ga0059261_3941	0.38	+0.1
4,057,510	-		Ga0059261_3941	0.38	+0.4
4,057,510	-		Ga0059261_3941	0.38	+0.6
4,057,530	+		Ga0059261_3941	0.39	+1.1
4,057,530	+		Ga0059261_3941	0.39	+0.5
4,057,530	+		Ga0059261_3941	0.39	+0.5
4,057,530	+		Ga0059261_3941	0.39	+0.5
4,057,530	+		Ga0059261_3941	0.39	+0.3
4,057,530	+		Ga0059261_3941	0.39	+0.2
4,057,530	+		Ga0059261_3941	0.39	+1.8
4,057,530	+		Ga0059261_3941	0.39	+1.0
4,057,531	-		Ga0059261_3941	0.39	+0.5
4,057,531	-		Ga0059261_3941	0.39	+0.8
4,057,531	-		Ga0059261_3941	0.39	-0.3
4,057,531	-		Ga0059261_3941	0.39	+0.6
4,057,531	-		Ga0059261_3941	0.39	-0.7
4,057,531	-		Ga0059261_3941	0.39	-0.7
4,057,605	+		Ga0059261_3941	0.42	+0.4
4,057,605	+		Ga0059261_3941	0.42	+1.4
4,057,606	-		Ga0059261_3941	0.42	-0.3
4,057,606	-		Ga0059261_3941	0.42	+0.2
4,057,606	-		Ga0059261_3941	0.42	+0.1
4,057,611	+		Ga0059261_3941	0.42	+0.3
4,057,611	+		Ga0059261_3941	0.42	+0.6
4,057,612	-		Ga0059261_3941	0.42	+1.6
4,057,740	+		Ga0059261_3941	0.47	+1.1
4,057,740	+		Ga0059261_3941	0.47	+0.1
4,057,741	-		Ga0059261_3941	0.47	+1.1
4,057,881	+		Ga0059261_3941	0.53	+1.5
4,057,881	+		Ga0059261_3941	0.53	-0.6
4,057,881	+		Ga0059261_3941	0.53	+0.9
4,057,881	+		Ga0059261_3941	0.53	+0.5
4,057,881	+		Ga0059261_3941	0.53	+1.3
4,057,881	+		Ga0059261_3941	0.53	+1.0
4,057,881	+		Ga0059261_3941	0.53	+0.5
4,057,881	+		Ga0059261_3941	0.53	+0.8
4,057,881	+		Ga0059261_3941	0.53	+0.8
4,057,881	+		Ga0059261_3941	0.53	-0.5
4,057,882	-		Ga0059261_3941	0.53	+1.3
4,057,882	-		Ga0059261_3941	0.53	-0.5
4,057,882	-		Ga0059261_3941	0.53	+1.2
4,057,882	-		Ga0059261_3941	0.53	+0.3
4,057,974	+		Ga0059261_3941	0.57	+0.4
4,057,974	+		Ga0059261_3941	0.57	+1.2
4,057,974	+		Ga0059261_3941	0.57	+0.0
4,057,974	+		Ga0059261_3941	0.57	+1.5
4,057,974	+		Ga0059261_3941	0.57	-1.7
4,057,974	+		Ga0059261_3941	0.57	+0.1
4,057,975	-		Ga0059261_3941	0.57	+1.1
4,058,172	+		Ga0059261_3941	0.65	+0.7
4,058,172	+		Ga0059261_3941	0.65	+0.4
4,058,172	+		Ga0059261_3941	0.65	+0.2
4,058,172	+		Ga0059261_3941	0.65	+1.1
4,058,172	+		Ga0059261_3941	0.65	-0.2
4,058,172	+		Ga0059261_3941	0.65	+0.8
4,058,172	+		Ga0059261_3941	0.65	+1.2
4,058,172	+		Ga0059261_3941	0.65	+3.3
4,058,172	+		Ga0059261_3941	0.65	+2.7
4,058,172	+		Ga0059261_3941	0.65	+0.2
4,058,172	+		Ga0059261_3941	0.65	+0.6
4,058,173	-		Ga0059261_3941	0.65	+0.1
4,058,173	-		Ga0059261_3941	0.65	+0.3
4,058,173	-		Ga0059261_3941	0.65	+0.1
4,058,173	-		Ga0059261_3941	0.65	+0.6
4,058,173	-		Ga0059261_3941	0.65	+0.2
4,058,173	-				+0.5
4,058,173	-		Ga0059261_3941	0.65	+0.2
4,058,173	-		Ga0059261_3941	0.65	+1.0
4,058,173	-		Ga0059261_3941	0.65	+0.1
4,058,173	-		Ga0059261_3941	0.65	+1.1
4,058,173	-		Ga0059261_3941	0.65	-0.5
4,058,202	+		Ga0059261_3941	0.66	-0.6
4,058,202	+		Ga0059261_3941	0.66	-0.1
4,058,202	+		Ga0059261_3941	0.66	+0.1
4,058,203	-		Ga0059261_3941	0.66	+1.6
4,058,203	-		Ga0059261_3941	0.66	+1.3
4,058,295	+		Ga0059261_3941	0.70	+0.2
4,058,295	+		Ga0059261_3941	0.70	+0.4
4,058,295	+				+2.7
4,058,296	-		Ga0059261_3941	0.70	-0.2
4,058,296	-		Ga0059261_3941	0.70	+0.5
4,058,383	-		Ga0059261_3941	0.73	+1.2
4,058,388	+		Ga0059261_3941	0.73	+0.5
4,058,388	+		Ga0059261_3941	0.73	+0.2
4,058,388	+		Ga0059261_3941	0.73	+1.4
4,058,389	-		Ga0059261_3941	0.73	+1.4
4,058,389	-		Ga0059261_3941	0.73	+0.3
4,058,451	+		Ga0059261_3941	0.76	+0.4
4,058,451	+		Ga0059261_3941	0.76	+0.8
4,058,452	-		Ga0059261_3941	0.76	+0.6
4,058,508	+		Ga0059261_3941	0.78	+1.0
4,058,509	-				+1.1
4,058,579	+		Ga0059261_3941	0.81	+0.6
4,058,580	-		Ga0059261_3941	0.81	-1.1
4,058,621	-		Ga0059261_3941	0.83	+0.6
4,058,634	+		Ga0059261_3941	0.83	+0.8
4,058,634	+		Ga0059261_3941	0.83	-0.5
4,058,634	+		Ga0059261_3941	0.83	+0.5
4,058,635	-		Ga0059261_3941	0.83	+1.9
4,058,635	-		Ga0059261_3941	0.83	-0.7
4,058,635	-		Ga0059261_3941	0.83	+0.2
4,058,949	+				+1.8
4,058,949	+				+0.5
4,058,950	-				+0.8
4,058,999	-				+0.3
4,058,999	-				+0.4
4,059,019	-				-0.9
4,059,019	-				+0.9
4,059,019	-				+0.9
4,059,066	+				+0.4
4,059,066	+				+1.5
4,059,066	+				+0.8
4,059,066	+				+0.8
4,059,066	+				+0.3
4,059,066	+				+0.1
4,059,066	+				+0.5
4,059,066	+				+0.3
4,059,067	-				+0.5
4,059,067	-				-0.2
4,059,067	-				+1.1
4,059,120	+				+0.6
4,059,120	+				+0.8
4,059,121	-				+2.1
4,059,121	-				+1.1
4,059,958	+		Ga0059261_3943	0.50	+1.1