Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3206

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,340,548	+		Ga0059261_3205	0.40	+0.4
3,340,548	+		Ga0059261_3205	0.40	+0.4
3,340,548	+		Ga0059261_3205	0.40	-0.4
3,340,549	-		Ga0059261_3205	0.40	+0.8
3,340,549	-		Ga0059261_3205	0.40	+0.8
3,340,735	-		Ga0059261_3205	0.55	+0.6
3,340,761	+		Ga0059261_3205	0.57	-0.3
3,340,761	+		Ga0059261_3205	0.57	+0.0
3,340,761	+		Ga0059261_3205	0.57	-0.4
3,340,761	+		Ga0059261_3205	0.57	+0.9
3,340,762	-		Ga0059261_3205	0.57	-0.8
3,340,762	-		Ga0059261_3205	0.57	+0.4
3,340,770	+		Ga0059261_3205	0.58	+1.0
3,340,770	+		Ga0059261_3205	0.58	+0.3
3,340,788	-		Ga0059261_3205	0.60	+0.2
3,340,788	-		Ga0059261_3205	0.60	+0.4
3,340,893	+		Ga0059261_3205	0.68	+1.2
3,340,893	+		Ga0059261_3205	0.68	+0.7
3,340,893	+		Ga0059261_3205	0.68	-1.0
3,340,894	-		Ga0059261_3205	0.69	+1.2
3,340,894	-		Ga0059261_3205	0.69	+1.2
3,340,894	-		Ga0059261_3205	0.69	-0.1
3,340,894	-		Ga0059261_3205	0.69	+0.6
3,340,894	-		Ga0059261_3205	0.69	+0.8
3,340,894	-		Ga0059261_3205	0.69	-0.1
3,340,894	-		Ga0059261_3205	0.69	+0.6
3,341,204	+				+0.4
3,341,204	+				-0.5
3,341,247	+				-0.1
3,341,247	+				-0.2
3,341,247	+				-0.0
3,341,247	+				-0.1
3,341,248	-				+0.5
3,341,248	-				+0.3
3,341,248	-				+0.3
3,341,248	-				+1.4
3,341,248	-				+0.2
3,341,427	+				+0.2
3,341,427	+				-0.0
3,341,428	-				+0.2
3,341,432	+				+2.2
3,341,433	-				+0.7
3,341,433	-				+0.2
3,341,433	-				-0.4
3,341,725	-		Ga0059261_3206	0.33	+0.2
3,341,743	+		Ga0059261_3206	0.35	+1.2
3,341,744	-		Ga0059261_3206	0.35	+0.9
3,341,744	-		Ga0059261_3206	0.35	+1.1
3,341,744	-		Ga0059261_3206	0.35	-0.1
3,341,744	-		Ga0059261_3206	0.35	+0.6
3,341,784	+		Ga0059261_3206	0.39	+0.7
3,341,785	-		Ga0059261_3206	0.39	-0.3
3,341,785	-		Ga0059261_3206	0.39	+1.2
3,341,785	-		Ga0059261_3206	0.39	+1.2
3,342,086	+		Ga0059261_3206	0.72	-0.1
3,342,150	+		Ga0059261_3206	0.79	+0.2
3,342,150	+		Ga0059261_3206	0.79	-0.8
3,342,462	+				-1.3
3,342,462	+				+0.2
3,342,462	+				+0.7
3,342,463	-				+1.2
3,342,463	-				-0.4
3,342,463	-				+0.4
3,342,463	-				-1.3
3,342,684	+		Ga0059261_3207	0.24	-1.1
3,342,744	+		Ga0059261_3207	0.30	-0.3
3,342,744	+		Ga0059261_3207	0.30	-0.4
3,342,745	-				-0.2
3,342,745	-		Ga0059261_3207	0.30	+0.7
3,342,745	-		Ga0059261_3207	0.30	-2.4
3,342,745	-		Ga0059261_3207	0.30	-0.4
3,342,745	-		Ga0059261_3207	0.30	-1.9
3,342,766	+		Ga0059261_3207	0.33	+2.2
3,342,767	-		Ga0059261_3207	0.33	-1.3
3,342,841	+		Ga0059261_3207	0.41	-0.1
3,342,841	+		Ga0059261_3207	0.41	+2.2
3,342,842	-		Ga0059261_3207	0.41	+0.9
3,342,883	+		Ga0059261_3207	0.45	+0.7
3,343,255	+		Ga0059261_3207	0.86	-1.5
3,343,255	+		Ga0059261_3207	0.86	+1.5
3,343,255	+		Ga0059261_3207	0.86	-0.8
3,343,256	-		Ga0059261_3207	0.86	+0.3
3,343,256	-		Ga0059261_3207	0.86	-1.2
3,343,256	-		Ga0059261_3207	0.86	-2.3
3,343,257	+		Ga0059261_3207	0.86	+0.8
3,343,257	+		Ga0059261_3207	0.86	-1.4