Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3205

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,339,194	+		Ga0059261_3203	0.76	+0.2
3,339,194	+		Ga0059261_3203	0.76	+0.2
3,339,205	+		Ga0059261_3203	0.77	+0.6
3,339,206	-		Ga0059261_3203	0.77	+0.5
3,339,254	+		Ga0059261_3203	0.83	+0.8
3,339,254	+		Ga0059261_3203	0.83	+0.9
3,339,254	+		Ga0059261_3203	0.83	-0.3
3,339,254	+		Ga0059261_3203	0.83	+0.5
3,339,254	+		Ga0059261_3203	0.83	+0.5
3,339,254	+		Ga0059261_3203	0.83	-0.1
3,339,255	-		Ga0059261_3203	0.83	+1.2
3,339,255	-		Ga0059261_3203	0.83	+0.6
3,339,255	-		Ga0059261_3203	0.83	+0.4
3,339,309	+		Ga0059261_3203	0.89	+0.8
3,339,310	-		Ga0059261_3203	0.89	+0.6
3,339,310	-		Ga0059261_3203	0.89	+1.7
3,339,310	-		Ga0059261_3203	0.89	-0.9
3,339,362	+				+0.4
3,339,362	+				+0.8
3,339,363	-				-0.1
3,339,405	+				-0.0
3,339,406	-				+0.2
3,339,406	-				+0.3
3,339,459	+				+0.3
3,339,459	+				-0.5
3,339,459	+				+0.4
3,339,459	+				-0.1
3,339,492	+				+0.0
3,339,492	+				+0.4
3,339,492	+				+0.0
3,339,493	-				+0.6
3,339,493	-				+0.4
3,339,493	-				-0.1
3,339,498	+				-0.3
3,339,498	+				+1.6
3,339,499	-				+0.4
3,339,499	-				-0.3
3,339,499	-				-0.3
3,339,596	-		Ga0059261_3204	0.26	-0.4
3,339,696	+		Ga0059261_3204	0.50	+0.6
3,339,697	-		Ga0059261_3204	0.51	+1.2
3,339,697	-		Ga0059261_3204	0.51	+0.6
3,339,703	+		Ga0059261_3204	0.52	+0.6
3,339,703	+		Ga0059261_3204	0.52	-0.2
3,339,704	-		Ga0059261_3204	0.52	+0.2
3,339,727	+		Ga0059261_3204	0.58	+0.2
3,339,727	+		Ga0059261_3204	0.58	+0.2
3,339,727	+		Ga0059261_3204	0.58	-0.1
3,339,727	+		Ga0059261_3204	0.58	+0.2
3,339,728	-		Ga0059261_3204	0.58	+0.5
3,339,728	-		Ga0059261_3204	0.58	+0.2
3,339,728	-		Ga0059261_3204	0.58	-0.2
3,339,728	-		Ga0059261_3204	0.58	+0.5
3,339,728	-		Ga0059261_3204	0.58	-0.5
3,339,728	-		Ga0059261_3204	0.58	+0.5
3,339,760	+		Ga0059261_3204	0.66	-0.2
3,339,760	+		Ga0059261_3204	0.66	+1.0
3,339,811	+				+1.2
3,339,812	-		Ga0059261_3204	0.79	-1.0
3,339,979	+				-0.4
3,339,980	-				+0.8
3,340,143	+				+0.3
3,340,144	-				-0.4
3,340,144	-				+0.3
3,340,144	-				+1.0
3,340,144	-				+0.3
3,340,144	-				+0.2
3,340,171	-				+0.4
3,340,171	-				+0.6
3,340,171	-				-0.8
3,340,171	-				+0.1
3,340,281	+		Ga0059261_3205	0.17	+0.9
3,340,282	-		Ga0059261_3205	0.17	+0.4
3,340,340	+		Ga0059261_3205	0.22	+1.7
3,340,404	+		Ga0059261_3205	0.28	+0.4
3,340,410	+		Ga0059261_3205	0.28	+0.4
3,340,410	+		Ga0059261_3205	0.28	+0.2
3,340,410	+		Ga0059261_3205	0.28	+0.2
3,340,410	+		Ga0059261_3205	0.28	+1.5
3,340,410	+		Ga0059261_3205	0.28	+1.4
3,340,410	+		Ga0059261_3205	0.28	+0.2
3,340,411	-		Ga0059261_3205	0.28	+1.1
3,340,411	-		Ga0059261_3205	0.28	-1.3
3,340,411	-		Ga0059261_3205	0.28	+0.2
3,340,411	-		Ga0059261_3205	0.28	+0.4
3,340,411	-		Ga0059261_3205	0.28	+0.2
3,340,411	-		Ga0059261_3205	0.28	-0.6
3,340,411	-		Ga0059261_3205	0.28	+0.9
3,340,411	-		Ga0059261_3205	0.28	-0.8
3,340,411	-		Ga0059261_3205	0.28	+0.4
3,340,411	-		Ga0059261_3205	0.28	-0.4
3,340,411	-		Ga0059261_3205	0.28	+1.4
3,340,411	-		Ga0059261_3205	0.28	+0.8
3,340,411	-		Ga0059261_3205	0.28	+0.9
3,340,548	+		Ga0059261_3205	0.40	+0.4
3,340,548	+		Ga0059261_3205	0.40	+0.4
3,340,548	+		Ga0059261_3205	0.40	-0.4
3,340,549	-		Ga0059261_3205	0.40	+0.8
3,340,549	-		Ga0059261_3205	0.40	+0.8
3,340,735	-		Ga0059261_3205	0.55	+0.6
3,340,761	+		Ga0059261_3205	0.57	-0.3
3,340,761	+		Ga0059261_3205	0.57	+0.0
3,340,761	+		Ga0059261_3205	0.57	-0.4
3,340,761	+		Ga0059261_3205	0.57	+0.9
3,340,762	-		Ga0059261_3205	0.57	-0.8
3,340,762	-		Ga0059261_3205	0.57	+0.4
3,340,770	+		Ga0059261_3205	0.58	+1.0
3,340,770	+		Ga0059261_3205	0.58	+0.3
3,340,788	-		Ga0059261_3205	0.60	+0.2
3,340,788	-		Ga0059261_3205	0.60	+0.4
3,340,893	+		Ga0059261_3205	0.68	+1.2
3,340,893	+		Ga0059261_3205	0.68	+0.7
3,340,893	+		Ga0059261_3205	0.68	-1.0
3,340,894	-		Ga0059261_3205	0.69	+1.2
3,340,894	-		Ga0059261_3205	0.69	+1.2
3,340,894	-		Ga0059261_3205	0.69	-0.1
3,340,894	-		Ga0059261_3205	0.69	+0.6
3,340,894	-		Ga0059261_3205	0.69	+0.8
3,340,894	-		Ga0059261_3205	0.69	-0.1
3,340,894	-		Ga0059261_3205	0.69	+0.6
3,341,204	+				+0.4
3,341,204	+				-0.5
3,341,247	+				-0.1
3,341,247	+				-0.2
3,341,247	+				-0.0
3,341,247	+				-0.1
3,341,248	-				+0.5
3,341,248	-				+0.3
3,341,248	-				+0.3
3,341,248	-				+1.4
3,341,248	-				+0.2
3,341,427	+				+0.2
3,341,427	+				-0.0
3,341,428	-				+0.2
3,341,432	+				+2.2
3,341,433	-				+0.7
3,341,433	-				+0.2
3,341,433	-				-0.4
3,341,725	-		Ga0059261_3206	0.33	+0.2
3,341,743	+		Ga0059261_3206	0.35	+1.2
3,341,744	-		Ga0059261_3206	0.35	+0.9
3,341,744	-		Ga0059261_3206	0.35	+1.1
3,341,744	-		Ga0059261_3206	0.35	-0.1
3,341,744	-		Ga0059261_3206	0.35	+0.6
3,341,784	+		Ga0059261_3206	0.39	+0.7
3,341,785	-		Ga0059261_3206	0.39	-0.3
3,341,785	-		Ga0059261_3206	0.39	+1.2
3,341,785	-		Ga0059261_3206	0.39	+1.2
3,342,086	+		Ga0059261_3206	0.72	-0.1
3,342,150	+		Ga0059261_3206	0.79	+0.2
3,342,150	+		Ga0059261_3206	0.79	-0.8