Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2473

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,556,028	-				-0.7
2,556,028	-				+0.9
2,556,044	+				-0.1
2,556,044	+				+0.2
2,556,044	+				-0.8
2,556,045	-				-0.7
2,556,045	-				-0.3
2,556,292	+		Ga0059261_2473	0.23	+0.1
2,556,292	+		Ga0059261_2473	0.23	-0.9
2,556,292	+		Ga0059261_2473	0.23	+0.8
2,556,292	+		Ga0059261_2473	0.23	+0.9
2,556,292	+		Ga0059261_2473	0.23	-0.1
2,556,293	-		Ga0059261_2473	0.23	+0.9
2,556,316	+		Ga0059261_2473	0.25	-0.3
2,556,316	+		Ga0059261_2473	0.25	+0.5
2,556,317	-		Ga0059261_2473	0.25	-0.0
2,556,317	-		Ga0059261_2473	0.25	-0.4
2,556,317	-		Ga0059261_2473	0.25	-0.2
2,556,317	-		Ga0059261_2473	0.25	+0.7
2,556,394	+		Ga0059261_2473	0.33	+0.3
2,556,394	+		Ga0059261_2473	0.33	-0.9
2,556,394	+		Ga0059261_2473	0.33	+0.1
2,556,394	+		Ga0059261_2473	0.33	-0.5
2,556,394	+		Ga0059261_2473	0.33	-0.5
2,556,394	+		Ga0059261_2473	0.33	+0.9
2,556,394	+		Ga0059261_2473	0.33	+1.0
2,556,395	-				+0.3
2,556,395	-		Ga0059261_2473	0.33	-2.4
2,556,395	-		Ga0059261_2473	0.33	-0.9
2,556,395	-		Ga0059261_2473	0.33	-0.1
2,556,395	-		Ga0059261_2473	0.33	-0.5
2,556,395	-		Ga0059261_2473	0.33	-1.9
2,556,395	-		Ga0059261_2473	0.33	+0.1
2,556,395	-		Ga0059261_2473	0.33	+0.1
2,556,395	-		Ga0059261_2473	0.33	+0.4
2,556,395	-		Ga0059261_2473	0.33	-0.7
2,556,714	+		Ga0059261_2473	0.65	-0.0
2,556,714	+		Ga0059261_2473	0.65	-0.4
2,556,714	+		Ga0059261_2473	0.65	-0.3
2,556,714	+		Ga0059261_2473	0.65	-0.5
2,556,715	-		Ga0059261_2473	0.65	-0.5
2,556,715	-		Ga0059261_2473	0.65	+0.6
2,556,715	-		Ga0059261_2473	0.65	-0.6
2,556,846	+		Ga0059261_2473	0.78	-0.1
2,556,847	-		Ga0059261_2473	0.78	-0.1
2,556,911	-		Ga0059261_2473	0.85	-1.1
2,557,063	+				+0.2
2,557,063	+				-0.3
2,557,063	+				-0.5
2,557,063	+				-0.5
2,557,063	+				+0.2
2,557,114	+				-0.0
2,557,114	+				+0.3
2,557,114	+				-0.7
2,557,114	+				-0.5
2,557,115	-				+1.9
2,557,115	-				-0.3
2,557,116	+				-0.2
2,557,116	+				-1.3
2,557,116	+				-0.5
2,557,117	-				-1.1
2,557,117	-				-0.7
2,557,117	-				-0.3
2,557,117	-				+0.9
2,557,117	-				-0.1
2,557,117	-				-0.6
2,557,271	+		Ga0059261_2474	0.30	+1.7
2,557,300	+		Ga0059261_2474	0.35	-0.3
2,557,300	+		Ga0059261_2474	0.35	+0.5
2,557,300	+		Ga0059261_2474	0.35	-0.4
2,557,301	-		Ga0059261_2474	0.35	+0.4
2,557,326	+		Ga0059261_2474	0.40	-0.3
2,557,327	-		Ga0059261_2474	0.40	-0.1
2,557,327	-		Ga0059261_2474	0.40	-0.1
2,557,327	-		Ga0059261_2474	0.40	+0.2
2,557,335	-		Ga0059261_2474	0.41	-0.0
2,557,378	+		Ga0059261_2474	0.49	-0.0
2,557,378	+		Ga0059261_2474	0.49	-0.9
2,557,379	-		Ga0059261_2474	0.49	+2.1
2,557,379	-		Ga0059261_2474	0.49	+0.3
2,557,379	-		Ga0059261_2474	0.49	-1.2
2,557,420	+		Ga0059261_2474	0.56	-0.0
2,557,420	+		Ga0059261_2474	0.56	-1.1
2,557,420	+		Ga0059261_2474	0.56	-0.1
2,557,421	-		Ga0059261_2474	0.56	+0.4
2,557,421	-		Ga0059261_2474	0.56	-0.9
2,557,666	+				-0.4
2,557,667	-				+0.1
2,557,667	-				+0.6
2,557,726	+				-0.1
2,557,726	+				+1.7
2,557,726	+				-0.4
2,557,726	+				-0.9
2,557,726	+				-0.0
2,557,726	+				-0.5
2,557,726	+				+0.6
2,557,726	+				+0.8
2,557,726	+				-0.8
2,557,726	+				-0.2
2,557,726	+				-0.8
2,557,726	+				+0.7
2,557,726	+				-0.1
2,557,727	-				-1.5
2,557,727	-				+0.3
2,557,727	-				+0.9
2,557,727	-				-1.4
2,557,727	-				+0.5
2,557,727	-				-0.5
2,557,727	-				+0.1
2,557,727	-				-0.7
2,557,727	-				-0.3
2,557,727	-				+0.9
2,557,727	-				-0.1
2,557,727	-				-0.7
2,557,727	-				-0.0
2,557,821	+		Ga0059261_2475	0.27	+1.1
2,557,821	+		Ga0059261_2475	0.27	+1.0
2,557,822	-		Ga0059261_2475	0.27	-0.7
2,557,822	-		Ga0059261_2475	0.27	-0.3
2,557,849	+		Ga0059261_2475	0.32	-0.1
2,557,849	+		Ga0059261_2475	0.32	-0.4
2,557,849	+		Ga0059261_2475	0.32	+0.0
2,557,849	+		Ga0059261_2475	0.32	-0.8
2,557,849	+		Ga0059261_2475	0.32	-0.0
2,557,849	+		Ga0059261_2475	0.32	+0.1
2,557,849	+		Ga0059261_2475	0.32	-0.8
2,557,849	+		Ga0059261_2475	0.32	-0.2
2,557,849	+		Ga0059261_2475	0.32	+0.6
2,557,850	-		Ga0059261_2475	0.32	-0.7
2,557,850	-		Ga0059261_2475	0.32	+0.7
2,557,850	-		Ga0059261_2475	0.32	-1.1
2,557,850	-		Ga0059261_2475	0.32	-1.9
2,557,850	-		Ga0059261_2475	0.32	-0.2
2,557,850	-		Ga0059261_2475	0.32	-0.4
2,557,850	-		Ga0059261_2475	0.32	+0.2
2,557,851	+		Ga0059261_2475	0.32	-0.1
2,557,852	-		Ga0059261_2475	0.32	-1.3
2,557,852	-		Ga0059261_2475	0.32	-0.7
2,557,852	-		Ga0059261_2475	0.32	+0.1
2,557,852	-		Ga0059261_2475	0.32	+0.4
2,557,852	-		Ga0059261_2475	0.32	+0.2
2,557,852	-		Ga0059261_2475	0.32	+0.1
2,557,985	+		Ga0059261_2475	0.56	-0.7
2,557,986	-		Ga0059261_2475	0.56	-0.4
2,557,986	-		Ga0059261_2475	0.56	+0.5
2,558,027	+		Ga0059261_2475	0.63	+1.5
2,558,027	+		Ga0059261_2475	0.63	-0.0
2,558,027	+		Ga0059261_2475	0.63	-0.3
2,558,027	+		Ga0059261_2475	0.63	-0.1
2,558,027	+		Ga0059261_2475	0.63	+0.0
2,558,027	+		Ga0059261_2475	0.63	+0.0
2,558,028	-		Ga0059261_2475	0.64	-0.4
2,558,028	-		Ga0059261_2475	0.64	+0.8
2,558,028	-		Ga0059261_2475	0.64	-0.4
2,558,028	-		Ga0059261_2475	0.64	-0.3
2,558,028	-		Ga0059261_2475	0.64	-0.6
2,558,041	+		Ga0059261_2475	0.66	-0.1