Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2309

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,415,483	+		Ga0059261_2308	0.36	+0.1
2,415,483	+		Ga0059261_2308	0.36	-0.0
2,415,483	+		Ga0059261_2308	0.36	+1.3
2,415,484	-		Ga0059261_2308	0.36	-0.2
2,415,484	-		Ga0059261_2308	0.36	-1.5
2,415,484	-		Ga0059261_2308	0.36	+1.3
2,415,484	-		Ga0059261_2308	0.36	+0.7
2,415,525	+		Ga0059261_2308	0.39	+1.0
2,415,591	+		Ga0059261_2308	0.43	+0.3
2,415,591	+		Ga0059261_2308	0.43	-0.2
2,415,591	+				+1.3
2,415,591	+		Ga0059261_2308	0.43	+0.3
2,415,591	+		Ga0059261_2308	0.43	-0.2
2,415,591	+				+1.9
2,415,592	-		Ga0059261_2308	0.43	-1.6
2,415,592	-		Ga0059261_2308	0.43	+0.2
2,415,592	-		Ga0059261_2308	0.43	+0.9
2,415,592	-		Ga0059261_2308	0.43	-0.2
2,415,592	-				+1.9
2,415,592	-		Ga0059261_2308	0.43	-0.2
2,415,592	-		Ga0059261_2308	0.43	-0.1
2,415,592	-		Ga0059261_2308	0.43	-0.1
2,415,592	-		Ga0059261_2308	0.43	-0.2
2,415,592	-		Ga0059261_2308	0.43	-0.1
2,415,592	-		Ga0059261_2308	0.43	+0.3
2,415,592	-		Ga0059261_2308	0.43	+0.8
2,415,660	+		Ga0059261_2308	0.48	-0.7
2,415,660	+		Ga0059261_2308	0.48	+0.7
2,415,660	+		Ga0059261_2308	0.48	+0.4
2,415,660	+		Ga0059261_2308	0.48	+0.6
2,415,660	+		Ga0059261_2308	0.48	+0.3
2,415,661	-		Ga0059261_2308	0.48	-1.0
2,415,661	-		Ga0059261_2308	0.48	+0.3
2,415,661	-		Ga0059261_2308	0.48	+0.4
2,415,729	+		Ga0059261_2308	0.53	-0.2
2,415,729	+		Ga0059261_2308	0.53	+0.1
2,415,729	+		Ga0059261_2308	0.53	-0.1
2,415,730	-		Ga0059261_2308	0.53	+1.0
2,415,730	-		Ga0059261_2308	0.53	-0.2
2,415,730	-		Ga0059261_2308	0.53	-0.2
2,415,730	-		Ga0059261_2308	0.53	+1.3
2,415,730	-		Ga0059261_2308	0.53	+0.9
2,415,730	-		Ga0059261_2308	0.53	-1.5
2,415,730	-		Ga0059261_2308	0.53	+1.3
2,415,730	-		Ga0059261_2308	0.53	+0.6
2,415,730	-		Ga0059261_2308	0.53	+0.2
2,415,730	-		Ga0059261_2308	0.53	-0.8
2,415,748	+		Ga0059261_2308	0.54	-0.7
2,415,748	+		Ga0059261_2308	0.54	+0.3
2,415,748	+		Ga0059261_2308	0.54	+0.8
2,415,748	+		Ga0059261_2308	0.54	-0.3
2,415,748	+		Ga0059261_2308	0.54	+2.2
2,415,748	+		Ga0059261_2308	0.54	+0.1
2,415,748	+		Ga0059261_2308	0.54	+0.8
2,415,748	+		Ga0059261_2308	0.54	-1.7
2,415,749	-		Ga0059261_2308	0.54	-0.4
2,415,749	-		Ga0059261_2308	0.54	+0.3
2,415,749	-		Ga0059261_2308	0.54	+1.1
2,415,749	-		Ga0059261_2308	0.54	+0.5
2,415,749	-		Ga0059261_2308	0.54	+0.1
2,415,749	-		Ga0059261_2308	0.54	+0.0
2,415,749	-		Ga0059261_2308	0.54	+0.5
2,415,749	-		Ga0059261_2308	0.54	-0.4
2,415,750	+				+0.8
2,415,750	+		Ga0059261_2308	0.54	-0.2
2,415,750	+		Ga0059261_2308	0.54	-0.8
2,415,750	+		Ga0059261_2308	0.54	-0.3
2,415,751	-		Ga0059261_2308	0.54	+0.0
2,415,751	-		Ga0059261_2308	0.54	-0.8
2,415,852	+		Ga0059261_2308	0.61	+0.9
2,415,852	+		Ga0059261_2308	0.61	+0.6
2,415,852	+		Ga0059261_2308	0.61	-0.5
2,415,852	+		Ga0059261_2308	0.61	+0.1
2,415,852	+		Ga0059261_2308	0.61	-0.5
2,415,852	+		Ga0059261_2308	0.61	+0.5
2,415,852	+		Ga0059261_2308	0.61	-0.2
2,415,852	+		Ga0059261_2308	0.61	-1.0
2,415,852	+		Ga0059261_2308	0.61	-0.0
2,415,853	-		Ga0059261_2308	0.61	-0.1
2,415,853	-		Ga0059261_2308	0.61	+0.2
2,415,853	-		Ga0059261_2308	0.61	+0.3
2,415,853	-		Ga0059261_2308	0.61	-0.7
2,415,853	-		Ga0059261_2308	0.61	+0.9
2,415,853	-		Ga0059261_2308	0.61	+0.6
2,415,853	-		Ga0059261_2308	0.61	-0.1
2,415,853	-		Ga0059261_2308	0.61	+1.5
2,415,853	-		Ga0059261_2308	0.61	-0.1
2,415,853	-		Ga0059261_2308	0.61	-0.2
2,415,853	-		Ga0059261_2308	0.61	+0.5
2,415,853	-				+1.0
2,415,853	-		Ga0059261_2308	0.61	+0.1
2,415,853	-		Ga0059261_2308	0.61	+0.3
2,415,853	-		Ga0059261_2308	0.61	+1.3
2,415,909	+		Ga0059261_2308	0.65	+0.0
2,415,909	+		Ga0059261_2308	0.65	+0.3
2,415,909	+		Ga0059261_2308	0.65	+0.3
2,415,909	+		Ga0059261_2308	0.65	+0.5
2,415,909	+		Ga0059261_2308	0.65	+0.1
2,416,011	+		Ga0059261_2308	0.72	+0.3
2,416,011	+		Ga0059261_2308	0.72	+0.1
2,416,012	-		Ga0059261_2308	0.72	+0.4
2,416,012	-		Ga0059261_2308	0.72	-0.9
2,416,012	-		Ga0059261_2308	0.72	-0.0
2,416,012	-		Ga0059261_2308	0.72	-0.3
2,416,147	-		Ga0059261_2308	0.82	-1.4
2,416,161	+		Ga0059261_2308	0.83	+0.6
2,416,161	+		Ga0059261_2308	0.83	+0.3
2,416,162	-		Ga0059261_2308	0.83	+0.4
2,416,162	-		Ga0059261_2308	0.83	-0.2
2,416,162	-		Ga0059261_2308	0.83	+1.8
2,416,162	-		Ga0059261_2308	0.83	-0.3
2,416,162	-		Ga0059261_2308	0.83	-0.1
2,416,278	+				+0.3
2,416,408	+				+0.3
2,416,408	+				+1.3
2,416,408	+				-0.7
2,416,408	+				-0.6
2,416,408	+				-0.8
2,416,408	+				+0.7
2,416,409	-				-0.1
2,416,519	+				-0.6
2,416,519	+				+0.3
2,416,590	+		Ga0059261_2309	0.16	+0.4
2,416,591	-		Ga0059261_2309	0.16	-1.5
2,416,959	-		Ga0059261_2309	0.53	+0.2
2,416,959	-		Ga0059261_2309	0.53	+0.5
2,417,155	-		Ga0059261_2309	0.72	+0.2
2,417,155	-		Ga0059261_2309	0.72	+0.3
2,417,289	+		Ga0059261_2309	0.86	+1.2
2,417,289	+		Ga0059261_2309	0.86	+0.9
2,417,289	+		Ga0059261_2309	0.86	+1.5
2,417,289	+		Ga0059261_2309	0.86	-0.3
2,417,290	-		Ga0059261_2309	0.86	+0.3
2,417,290	-				+2.3
2,417,290	-		Ga0059261_2309	0.86	-0.5
2,417,385	-				+1.0
2,417,385	-				+0.8
2,417,430	+				-0.0
2,417,430	+				+0.6
2,417,430	+				-1.2
2,417,430	+				+0.1
2,417,430	+				+0.2
2,417,430	+				+0.3
2,417,430	+				+0.0
2,417,430	+				+0.5
2,417,431	-				+0.9
2,417,431	-				-1.1
2,417,431	-				-0.1
2,417,431	-				+0.7
2,417,431	-				+0.5
2,417,431	-				-1.4
2,417,453	+				+0.9
2,417,453	+				+1.0
2,417,453	+				+0.8
2,417,453	+				+1.3
2,417,453	+				+0.1
2,417,454	-				-0.1
2,417,454	-				-0.1
2,417,454	-				-0.3
2,417,457	+				-0.4
2,417,457	+				-0.5
2,417,458	-				-0.3
2,417,458	-				-0.3
2,417,458	-				+0.2
2,417,604	+				+2.3
2,417,604	+				-0.3
2,417,604	+				-0.0
2,417,604	+				-0.4
2,417,605	-				-0.1
2,417,605	-				+0.2
2,417,699	-				+1.0
2,417,911	+		Ga0059261_2310	0.13	-0.4
2,417,912	-		Ga0059261_2310	0.13	+0.3
2,417,917	+		Ga0059261_2310	0.13	-0.6
2,417,917	+		Ga0059261_2310	0.13	-0.8
2,417,917	+		Ga0059261_2310	0.13	+0.3
2,417,917	+		Ga0059261_2310	0.13	+0.3
2,417,917	+		Ga0059261_2310	0.13	+0.5
2,417,917	+		Ga0059261_2310	0.13	-0.1
2,417,917	+		Ga0059261_2310	0.13	-0.2
2,417,917	+		Ga0059261_2310	0.13	+0.3
2,417,917	+		Ga0059261_2310	0.13	-0.2
2,417,917	+		Ga0059261_2310	0.13	+0.8
2,417,917	+		Ga0059261_2310	0.13	-0.2
2,417,917	+		Ga0059261_2310	0.13	+0.9
2,417,917	+		Ga0059261_2310	0.13	-0.1
2,417,917	+		Ga0059261_2310	0.13	+0.0
2,417,917	+		Ga0059261_2310	0.13	-0.1
2,417,917	+		Ga0059261_2310	0.13	-1.1
2,417,917	+		Ga0059261_2310	0.13	-0.1
2,417,917	+		Ga0059261_2310	0.13	-0.9
2,417,917	+		Ga0059261_2310	0.13	-0.1
2,417,917	+		Ga0059261_2310	0.13	+0.3
2,417,917	+		Ga0059261_2310	0.13	-0.0
2,417,917	+		Ga0059261_2310	0.13	+0.3
2,417,917	+		Ga0059261_2310	0.13	+0.0
2,417,917	+		Ga0059261_2310	0.13	+0.2
2,417,918	-		Ga0059261_2310	0.13	+0.3
2,417,918	-				-1.2
2,417,918	-		Ga0059261_2310	0.13	+0.3
2,417,918	-		Ga0059261_2310	0.13	+0.3
2,417,918	-		Ga0059261_2310	0.13	+0.1
2,417,918	-		Ga0059261_2310	0.13	+0.1
2,417,918	-		Ga0059261_2310	0.13	+0.5
2,417,918	-		Ga0059261_2310	0.13	+0.7
2,417,918	-		Ga0059261_2310	0.13	+0.2
2,417,918	-		Ga0059261_2310	0.13	-0.2
2,417,918	-		Ga0059261_2310	0.13	+1.3
2,417,918	-		Ga0059261_2310	0.13	+0.3
2,417,918	-		Ga0059261_2310	0.13	-0.3
2,417,918	-		Ga0059261_2310	0.13	+0.3
2,417,918	-		Ga0059261_2310	0.13	+0.5
2,417,918	-		Ga0059261_2310	0.13	-0.0
2,417,918	-		Ga0059261_2310	0.13	-0.4
2,417,918	-		Ga0059261_2310	0.13	-0.3
2,417,918	-		Ga0059261_2310	0.13	-0.2
2,417,918	-		Ga0059261_2310	0.13	+0.1
2,417,918	-		Ga0059261_2310	0.13	-0.0
2,417,918	-		Ga0059261_2310	0.13	-0.2
2,417,918	-		Ga0059261_2310	0.13	-0.0
2,417,918	-				+1.3
2,417,918	-		Ga0059261_2310	0.13	+0.3
2,417,918	-		Ga0059261_2310	0.13	+0.8
2,417,918	-		Ga0059261_2310	0.13	+0.3
2,417,918	-		Ga0059261_2310	0.13	-0.3
2,417,918	-		Ga0059261_2310	0.13	-0.2
2,417,990	-		Ga0059261_2310	0.17	+0.3
2,417,990	-		Ga0059261_2310	0.17	-0.8
2,417,990	-		Ga0059261_2310	0.17	+0.1
2,417,990	-		Ga0059261_2310	0.17	-0.9
2,418,086	+		Ga0059261_2310	0.21	-0.9
2,418,086	+		Ga0059261_2310	0.21	+0.6
2,418,086	+		Ga0059261_2310	0.21	+0.8
2,418,086	+		Ga0059261_2310	0.21	+1.0
2,418,086	+		Ga0059261_2310	0.21	+0.3
2,418,086	+		Ga0059261_2310	0.21	+0.1
2,418,086	+		Ga0059261_2310	0.21	+0.7
2,418,086	+		Ga0059261_2310	0.21	-0.5
2,418,087	-		Ga0059261_2310	0.21	+0.2
2,418,260	-		Ga0059261_2310	0.28	+0.3
2,418,293	+		Ga0059261_2310	0.30	+0.2
2,418,293	+		Ga0059261_2310	0.30	-0.4
2,418,320	+		Ga0059261_2310	0.31	+1.0
2,418,320	+		Ga0059261_2310	0.31	-0.3
2,418,320	+		Ga0059261_2310	0.31	+0.3
2,418,320	+		Ga0059261_2310	0.31	+1.8
2,418,320	+		Ga0059261_2310	0.31	+0.1
2,418,320	+		Ga0059261_2310	0.31	-0.2
2,418,320	+		Ga0059261_2310	0.31	-0.2
2,418,320	+		Ga0059261_2310	0.31	-0.5
2,418,320	+		Ga0059261_2310	0.31	-1.8
2,418,320	+		Ga0059261_2310	0.31	-0.1
2,418,321	-		Ga0059261_2310	0.31	+0.5
2,418,321	-		Ga0059261_2310	0.31	-1.3
2,418,321	-		Ga0059261_2310	0.31	+0.1
2,418,321	-		Ga0059261_2310	0.31	+1.1
2,418,321	-		Ga0059261_2310	0.31	-1.1
2,418,321	-		Ga0059261_2310	0.31	+0.2
2,418,321	-		Ga0059261_2310	0.31	-0.1
2,418,321	-		Ga0059261_2310	0.31	-0.2
2,418,321	-				-0.2
2,418,321	-		Ga0059261_2310	0.31	+0.5
2,418,321	-		Ga0059261_2310	0.31	+0.4
2,418,362	+		Ga0059261_2310	0.33	+0.5
2,418,362	+		Ga0059261_2310	0.33	+0.2
2,418,362	+		Ga0059261_2310	0.33	+0.2
2,418,363	-		Ga0059261_2310	0.33	+0.5
2,418,363	-		Ga0059261_2310	0.33	+1.3