Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1870

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,980,242	+				-3.9
1,980,242	+				-1.0
1,980,242	+				-1.6
1,980,242	+				-1.4
1,980,242	+				-1.7
1,980,243	-				-2.0
1,980,243	-				-1.9
1,980,243	-				-0.6
1,980,243	-				-0.9
1,980,636	+		Ga0059261_1869	0.42	-0.8
1,980,637	-		Ga0059261_1869	0.43	-1.2
1,980,909	+		Ga0059261_1869	0.71	-1.1
1,980,909	+		Ga0059261_1869	0.71	-3.3
1,980,910	-		Ga0059261_1869	0.71	-1.0
1,980,912	+		Ga0059261_1869	0.71	-1.9
1,980,912	+		Ga0059261_1869	0.71	-3.3
1,980,912	+		Ga0059261_1869	0.71	-2.0
1,980,912	+		Ga0059261_1869	0.71	-2.2
1,980,913	-		Ga0059261_1869	0.71	-1.6
1,981,079	+		Ga0059261_1869	0.88	-1.5
1,981,079	+		Ga0059261_1869	0.88	-3.1
1,981,080	-		Ga0059261_1869	0.88	-1.5
1,981,080	-		Ga0059261_1869	0.88	-2.3
1,981,153	+				+0.4
1,981,154	-				-1.5
1,981,154	-				+0.1
1,981,196	+				-4.0
1,981,196	+				-2.3
1,981,196	+				-1.2
1,981,196	+				-1.4
1,981,196	+				-0.5
1,981,196	+				-2.2
1,981,197	-				-1.5
1,981,197	-				-2.0
1,981,197	-				-1.6
1,981,197	-				-2.1
1,981,197	-				-0.4
1,981,197	-				-0.6
1,981,197	-				-2.0
1,981,197	-				-2.0
1,981,197	-				+0.4
1,981,271	-				-1.9
1,981,271	-				-0.9
1,981,271	-				-1.5
1,981,372	+				-0.2
1,981,372	+		Ga0059261_1870	0.21	-0.9
1,981,372	+		Ga0059261_1870	0.21	-2.4
1,981,372	+				-1.4
1,981,372	+		Ga0059261_1870	0.21	-1.6
1,981,372	+		Ga0059261_1870	0.21	-0.9
1,981,372	+		Ga0059261_1870	0.21	-1.2
1,981,373	-		Ga0059261_1870	0.21	-0.6
1,981,373	-		Ga0059261_1870	0.21	+0.5
1,981,373	-		Ga0059261_1870	0.21	-1.4
1,981,373	-		Ga0059261_1870	0.21	-1.3
1,981,373	-		Ga0059261_1870	0.21	-0.4
1,981,373	-		Ga0059261_1870	0.21	-0.6
1,981,576	+		Ga0059261_1870	0.45	-0.8
1,981,577	-		Ga0059261_1870	0.45	-3.1
1,981,577	-		Ga0059261_1870	0.45	-1.5
1,981,621	+		Ga0059261_1870	0.51	-1.2
1,981,621	+		Ga0059261_1870	0.51	-1.7
1,981,621	+		Ga0059261_1870	0.51	-0.7
1,981,621	+		Ga0059261_1870	0.51	-0.6
1,981,621	+				+1.4
1,981,622	-		Ga0059261_1870	0.51	-1.1
1,981,776	-		Ga0059261_1870	0.70	-2.6
1,982,160	+		Ga0059261_1871	0.12	-1.6
1,982,160	+		Ga0059261_1871	0.12	-1.4
1,982,160	+		Ga0059261_1871	0.12	-3.1
1,982,161	-		Ga0059261_1871	0.12	-0.8
1,982,161	-		Ga0059261_1871	0.12	+0.4
1,982,161	-		Ga0059261_1871	0.12	-2.8
1,982,161	-		Ga0059261_1871	0.12	-1.2
1,982,217	+		Ga0059261_1871	0.17	-2.1
1,982,217	+		Ga0059261_1871	0.17	+0.7
1,982,217	+		Ga0059261_1871	0.17	-1.9
1,982,217	+		Ga0059261_1871	0.17	-0.2
1,982,217	+		Ga0059261_1871	0.17	-0.7
1,982,217	+		Ga0059261_1871	0.17	-1.4
1,982,217	+		Ga0059261_1871	0.17	-1.9
1,982,218	-		Ga0059261_1871	0.18	-1.9
1,982,218	-		Ga0059261_1871	0.18	-0.4
1,982,218	-				-0.9
1,982,218	-		Ga0059261_1871	0.18	-0.3
1,982,218	-		Ga0059261_1871	0.18	-0.7
1,982,275	+		Ga0059261_1871	0.23	-1.4
1,982,331	+		Ga0059261_1871	0.28	-2.3
1,982,331	+		Ga0059261_1871	0.28	-2.8
1,982,331	+		Ga0059261_1871	0.28	-1.8
1,982,331	+		Ga0059261_1871	0.28	-0.2
1,982,331	+		Ga0059261_1871	0.28	-1.7
1,982,331	+		Ga0059261_1871	0.28	-2.2
1,982,331	+		Ga0059261_1871	0.28	-1.4
1,982,332	-		Ga0059261_1871	0.28	-1.2
1,982,332	-		Ga0059261_1871	0.28	-2.4
1,982,332	-				-0.2
1,982,332	-		Ga0059261_1871	0.28	-2.0
1,982,556	+		Ga0059261_1871	0.48	-1.2
1,982,556	+		Ga0059261_1871	0.48	-1.9
1,982,556	+				-0.2
1,982,556	+		Ga0059261_1871	0.48	-0.6
1,982,557	-		Ga0059261_1871	0.48	-0.9
1,982,557	-		Ga0059261_1871	0.48	-1.7
1,982,557	-		Ga0059261_1871	0.48	-1.2
1,982,557	-		Ga0059261_1871	0.48	-0.9
1,982,557	-		Ga0059261_1871	0.48	-0.6
1,982,766	+		Ga0059261_1871	0.67	+0.4
1,982,766	+				+1.4
1,982,766	+		Ga0059261_1871	0.67	-1.2
1,982,767	-		Ga0059261_1871	0.67	-0.0
1,982,767	-		Ga0059261_1871	0.67	-1.3
1,982,767	-		Ga0059261_1871	0.67	-1.1
1,982,767	-		Ga0059261_1871	0.67	-0.8
1,982,992	+		Ga0059261_1871	0.87	-0.2
1,982,992	+		Ga0059261_1871	0.87	-0.6
1,982,993	-		Ga0059261_1871	0.88	-1.1
1,982,993	-		Ga0059261_1871	0.88	-1.2