Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1683

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,785,119	+				-0.2
1,785,119	+				+0.6
1,785,131	+				+1.6
1,785,131	+				+0.3
1,785,131	+				-0.5
1,785,131	+				+0.1
1,785,131	+				-0.3
1,785,131	+				-0.8
1,785,131	+				+0.4
1,785,131	+				-0.2
1,785,131	+				+0.1
1,785,131	+				-0.1
1,785,131	+				+0.1
1,785,131	+				+1.5
1,785,131	+				+0.1
1,785,131	+				-0.3
1,785,132	-				-0.3
1,785,132	-				+0.0
1,785,132	-				+0.2
1,785,132	-				+1.1
1,785,132	-				-0.2
1,785,132	-				+0.3
1,785,132	-				-0.7
1,785,132	-				+0.3
1,785,132	-				+0.3
1,785,132	-				+0.9
1,785,132	-				+0.4
1,785,141	+				-0.5
1,785,141	+				+0.4
1,785,260	+		Ga0059261_1682	0.22	+0.6
1,785,260	+		Ga0059261_1682	0.22	+0.3
1,785,260	+		Ga0059261_1682	0.22	+0.1
1,785,260	+		Ga0059261_1682	0.22	-0.1
1,785,260	+		Ga0059261_1682	0.22	-0.7
1,785,260	+		Ga0059261_1682	0.22	+0.1
1,785,260	+		Ga0059261_1682	0.22	+0.1
1,785,260	+		Ga0059261_1682	0.22	+1.1
1,785,260	+		Ga0059261_1682	0.22	-0.7
1,785,261	-		Ga0059261_1682	0.22	+1.3
1,785,261	-		Ga0059261_1682	0.22	-1.5
1,785,261	-		Ga0059261_1682	0.22	-0.2
1,785,261	-		Ga0059261_1682	0.22	-0.3
1,785,261	-		Ga0059261_1682	0.22	-0.2
1,785,301	-		Ga0059261_1682	0.26	-0.8
1,785,301	-		Ga0059261_1682	0.26	+1.3
1,785,301	-		Ga0059261_1682	0.26	-0.4
1,785,302	+		Ga0059261_1682	0.26	+1.3
1,785,302	+		Ga0059261_1682	0.26	+0.8
1,785,302	+		Ga0059261_1682	0.26	+0.2
1,785,303	-		Ga0059261_1682	0.27	-0.1
1,785,303	-		Ga0059261_1682	0.27	-0.9
1,785,303	-				+1.3
1,785,404	+		Ga0059261_1682	0.37	-0.9
1,785,404	+		Ga0059261_1682	0.37	-1.0
1,785,404	+		Ga0059261_1682	0.37	+0.2
1,785,405	-		Ga0059261_1682	0.37	-0.3
1,785,405	-		Ga0059261_1682	0.37	+0.2
1,785,405	-		Ga0059261_1682	0.37	-1.4
1,785,405	-		Ga0059261_1682	0.37	+0.0
1,785,405	-		Ga0059261_1682	0.37	-0.1
1,785,405	-		Ga0059261_1682	0.37	+0.1
1,785,552	-		Ga0059261_1682	0.52	+0.4
1,785,552	-		Ga0059261_1682	0.52	+0.7
1,785,563	+		Ga0059261_1682	0.53	-0.2
1,785,563	+		Ga0059261_1682	0.53	-0.4
1,785,563	+		Ga0059261_1682	0.53	+0.2
1,785,563	+		Ga0059261_1682	0.53	+0.7
1,785,563	+		Ga0059261_1682	0.53	+0.4
1,785,563	+		Ga0059261_1682	0.53	-0.3
1,785,564	-		Ga0059261_1682	0.53	-0.6
1,785,564	-		Ga0059261_1682	0.53	-0.0
1,785,564	-		Ga0059261_1682	0.53	+0.2
1,785,564	-		Ga0059261_1682	0.53	-0.1
1,785,564	-		Ga0059261_1682	0.53	+0.5
1,785,564	-		Ga0059261_1682	0.53	+0.7
1,785,564	-		Ga0059261_1682	0.53	-0.4
1,785,564	-		Ga0059261_1682	0.53	+0.7
1,785,564	-		Ga0059261_1682	0.53	-0.3
1,785,929	+				+0.7
1,786,003	-				-0.3
1,786,028	+				+0.3
1,786,028	+				-0.4
1,786,028	+				+0.6
1,786,028	+				-1.2
1,786,029	-				+0.7
1,786,029	-				-0.1
1,786,036	-				+0.3
1,786,036	-				+0.1
1,786,036	-				+0.7
1,786,094	+				+0.5
1,786,094	+				+0.4
1,786,095	-				-0.4
1,786,136	+				+0.7
1,786,481	+		Ga0059261_1683	0.34	-0.1
1,786,488	+		Ga0059261_1683	0.35	-0.2
1,786,488	+		Ga0059261_1683	0.35	+0.3
1,786,489	-		Ga0059261_1683	0.35	+0.4
1,786,587	+		Ga0059261_1683	0.42	-0.5
1,786,587	+		Ga0059261_1683	0.42	-0.0
1,786,662	+		Ga0059261_1683	0.48	-0.2
1,786,682	+		Ga0059261_1683	0.50	-0.6
1,786,682	+		Ga0059261_1683	0.50	-0.1
1,786,682	+		Ga0059261_1683	0.50	+0.7
1,786,682	+		Ga0059261_1683	0.50	-0.4
1,786,682	+		Ga0059261_1683	0.50	+0.8
1,786,682	+		Ga0059261_1683	0.50	+0.0
1,786,682	+		Ga0059261_1683	0.50	+0.4
1,786,682	+		Ga0059261_1683	0.50	+0.6
1,786,682	+		Ga0059261_1683	0.50	-0.6
1,786,682	+		Ga0059261_1683	0.50	+0.4
1,786,682	+		Ga0059261_1683	0.50	+0.1
1,786,683	-		Ga0059261_1683	0.50	-0.0
1,786,683	-		Ga0059261_1683	0.50	-0.5
1,786,683	-		Ga0059261_1683	0.50	-0.6
1,786,683	-		Ga0059261_1683	0.50	+0.2
1,786,683	-		Ga0059261_1683	0.50	-0.3
1,786,683	-		Ga0059261_1683	0.50	+0.5
1,786,683	-		Ga0059261_1683	0.50	+0.1
1,786,683	-		Ga0059261_1683	0.50	+0.7
1,786,683	-		Ga0059261_1683	0.50	+0.0
1,786,683	-		Ga0059261_1683	0.50	-0.2
1,786,683	-		Ga0059261_1683	0.50	+0.0
1,786,683	-		Ga0059261_1683	0.50	+0.6
1,786,683	-		Ga0059261_1683	0.50	+1.0
1,786,683	-		Ga0059261_1683	0.50	-0.2
1,786,686	+		Ga0059261_1683	0.50	-0.4
1,786,686	+		Ga0059261_1683	0.50	+0.7
1,786,686	+		Ga0059261_1683	0.50	+0.1
1,786,687	-		Ga0059261_1683	0.50	+0.0
1,786,687	-		Ga0059261_1683	0.50	-0.2
1,786,736	+		Ga0059261_1683	0.54	-0.6
1,786,736	+		Ga0059261_1683	0.54	-0.7
1,786,736	+		Ga0059261_1683	0.54	-0.1
1,786,736	+		Ga0059261_1683	0.54	+1.0
1,786,806	+		Ga0059261_1683	0.59	+0.1
1,786,806	+		Ga0059261_1683	0.59	+0.1
1,786,806	+		Ga0059261_1683	0.59	-0.5
1,786,807	-		Ga0059261_1683	0.59	-0.7
1,786,807	-		Ga0059261_1683	0.59	+0.2
1,786,807	-		Ga0059261_1683	0.59	+0.1
1,786,807	-		Ga0059261_1683	0.59	+0.6
1,786,898	-		Ga0059261_1683	0.66	+0.1
1,786,923	+		Ga0059261_1683	0.68	+0.3
1,786,923	+		Ga0059261_1683	0.68	-0.2
1,786,923	+		Ga0059261_1683	0.68	+0.0
1,786,923	+		Ga0059261_1683	0.68	-0.7
1,786,923	+		Ga0059261_1683	0.68	+1.4
1,786,923	+		Ga0059261_1683	0.68	-0.3
1,786,923	+		Ga0059261_1683	0.68	+0.4
1,786,924	-		Ga0059261_1683	0.68	-0.2
1,786,924	-		Ga0059261_1683	0.68	+1.0
1,786,924	-		Ga0059261_1683	0.68	+0.5
1,786,924	-		Ga0059261_1683	0.68	-0.3
1,786,924	-		Ga0059261_1683	0.68	-0.5
1,786,925	+		Ga0059261_1683	0.69	+0.3
1,786,925	+		Ga0059261_1683	0.69	-0.1
1,786,925	+		Ga0059261_1683	0.69	+0.7
1,786,925	+		Ga0059261_1683	0.69	+0.6
1,786,925	+		Ga0059261_1683	0.69	+1.3
1,786,925	+		Ga0059261_1683	0.69	+0.0
1,786,925	+		Ga0059261_1683	0.69	-1.4
1,786,925	+		Ga0059261_1683	0.69	+0.3
1,786,925	+		Ga0059261_1683	0.69	-0.6
1,786,925	+		Ga0059261_1683	0.69	+0.6
1,786,925	+		Ga0059261_1683	0.69	-0.7
1,786,925	+		Ga0059261_1683	0.69	-0.7
1,786,926	-		Ga0059261_1683	0.69	+0.5
1,786,926	-		Ga0059261_1683	0.69	-0.3
1,786,926	-		Ga0059261_1683	0.69	+0.2
1,786,926	-		Ga0059261_1683	0.69	+1.2
1,786,926	-		Ga0059261_1683	0.69	+0.0
1,786,926	-		Ga0059261_1683	0.69	+1.3
1,786,926	-		Ga0059261_1683	0.69	-0.1
1,786,926	-		Ga0059261_1683	0.69	+0.7
1,786,926	-		Ga0059261_1683	0.69	-0.7
1,786,926	-		Ga0059261_1683	0.69	+0.2
1,786,926	-		Ga0059261_1683	0.69	+1.2
1,786,926	-		Ga0059261_1683	0.69	-0.7
1,786,961	+		Ga0059261_1683	0.71	+0.4
1,787,066	+		Ga0059261_1683	0.80	-0.1
1,787,066	+		Ga0059261_1683	0.80	+1.1
1,787,066	+		Ga0059261_1683	0.80	-0.3
1,787,066	+		Ga0059261_1683	0.80	-0.3
1,787,066	+		Ga0059261_1683	0.80	-0.3
1,787,066	+		Ga0059261_1683	0.80	+0.0
1,787,067	-		Ga0059261_1683	0.80	-0.8
1,787,067	-		Ga0059261_1683	0.80	-0.3
1,787,067	-		Ga0059261_1683	0.80	-1.1
1,787,067	-		Ga0059261_1683	0.80	-0.9
1,787,067	-		Ga0059261_1683	0.80	-0.3
1,787,067	-		Ga0059261_1683	0.80	+0.4
1,787,150	+		Ga0059261_1683	0.86	+0.5
1,787,150	+		Ga0059261_1683	0.86	+0.6
1,787,150	+		Ga0059261_1683	0.86	-0.1
1,787,150	+		Ga0059261_1683	0.86	+0.9
1,787,150	+		Ga0059261_1683	0.86	+1.5
1,787,150	+		Ga0059261_1683	0.86	+0.2
1,787,151	-		Ga0059261_1683	0.86	-0.9
1,787,151	-		Ga0059261_1683	0.86	-0.4
1,787,151	-		Ga0059261_1683	0.86	+2.3
1,787,255	+				+0.3
1,787,256	-				+0.3
1,787,400	+				-0.8
1,787,437	-				+0.7
1,787,451	+				-0.0
1,787,451	+				+0.1
1,787,452	-				+0.0
1,787,452	-				-0.2
1,787,452	-				+0.6
1,787,452	-				+0.6
1,787,452	-				-0.4
1,788,029	+		Ga0059261_1684	0.74	-0.8
1,788,029	+		Ga0059261_1684	0.74	-0.1
1,788,029	+		Ga0059261_1684	0.74	+0.8
1,788,030	-		Ga0059261_1684	0.74	+0.1
1,788,030	-		Ga0059261_1684	0.74	+0.2
1,788,030	-		Ga0059261_1684	0.74	+0.1
1,788,030	-		Ga0059261_1684	0.74	+0.6
1,788,031	+		Ga0059261_1684	0.74	-0.1
1,788,031	+		Ga0059261_1684	0.74	-0.6
1,788,031	+		Ga0059261_1684	0.74	-1.1
1,788,031	+		Ga0059261_1684	0.74	+0.4
1,788,031	+		Ga0059261_1684	0.74	+0.3
1,788,031	+		Ga0059261_1684	0.74	+0.7
1,788,031	+		Ga0059261_1684	0.74	-0.5
1,788,031	+		Ga0059261_1684	0.74	+1.7
1,788,031	+		Ga0059261_1684	0.74	+0.8
1,788,031	+		Ga0059261_1684	0.74	-0.9
1,788,031	+		Ga0059261_1684	0.74	-0.9
1,788,031	+		Ga0059261_1684	0.74	+2.3
1,788,031	+		Ga0059261_1684	0.74	+0.1
1,788,031	+		Ga0059261_1684	0.74	+0.7
1,788,031	+		Ga0059261_1684	0.74	-0.9
1,788,031	+		Ga0059261_1684	0.74	+0.9
1,788,031	+		Ga0059261_1684	0.74	+1.2
1,788,031	+		Ga0059261_1684	0.74	+0.7
1,788,032	-		Ga0059261_1684	0.74	+0.6
1,788,032	-		Ga0059261_1684	0.74	+0.3
1,788,032	-		Ga0059261_1684	0.74	+0.4
1,788,032	-		Ga0059261_1684	0.74	-0.2
1,788,032	-		Ga0059261_1684	0.74	-0.7
1,788,032	-		Ga0059261_1684	0.74	+0.3
1,788,032	-		Ga0059261_1684	0.74	+0.3
1,788,032	-		Ga0059261_1684	0.74	-0.1
1,788,032	-		Ga0059261_1684	0.74	-0.3
1,788,032	-		Ga0059261_1684	0.74	-0.3
1,788,032	-		Ga0059261_1684	0.74	-0.7
1,788,161	+				-0.8
1,788,161	+				-0.3
1,788,161	+				+1.9
1,788,162	-				-0.5
1,788,162	-				+0.0
1,788,162	-				+0.5
1,788,162	-				-0.7
1,788,162	-				-0.5
1,788,227	+				-1.3
1,788,228	-				+1.0