Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1680

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,781,665	+		Ga0059261_1679	0.26	+0.2
1,781,665	+		Ga0059261_1679	0.26	+0.1
1,781,666	-		Ga0059261_1679	0.26	+0.3
1,781,666	-		Ga0059261_1679	0.26	+0.1
1,781,666	-		Ga0059261_1679	0.26	+0.0
1,781,666	-		Ga0059261_1679	0.26	-0.2
1,781,666	-		Ga0059261_1679	0.26	-0.5
1,781,667	+		Ga0059261_1679	0.26	-0.4
1,781,667	+		Ga0059261_1679	0.26	+1.7
1,781,667	+		Ga0059261_1679	0.26	+0.1
1,781,668	-		Ga0059261_1679	0.26	+0.5
1,781,668	-		Ga0059261_1679	0.26	+0.4
1,781,668	-		Ga0059261_1679	0.26	-0.6
1,781,668	-		Ga0059261_1679	0.26	-0.6
1,781,668	-		Ga0059261_1679	0.26	+0.1
1,781,668	-		Ga0059261_1679	0.26	+0.9
1,781,668	-		Ga0059261_1679	0.26	+0.1
1,781,733	+		Ga0059261_1679	0.31	+0.8
1,781,733	+		Ga0059261_1679	0.31	+0.2
1,781,733	+		Ga0059261_1679	0.31	+0.0
1,781,733	+		Ga0059261_1679	0.31	+0.1
1,781,733	+		Ga0059261_1679	0.31	+1.1
1,781,733	+		Ga0059261_1679	0.31	+0.5
1,781,733	+		Ga0059261_1679	0.31	+0.6
1,781,733	+		Ga0059261_1679	0.31	-0.0
1,781,734	-		Ga0059261_1679	0.31	+0.6
1,781,734	-		Ga0059261_1679	0.31	+0.1
1,781,734	-		Ga0059261_1679	0.31	-1.1
1,781,970	+		Ga0059261_1679	0.50	+0.5
1,781,971	-		Ga0059261_1679	0.50	+0.5
1,781,971	-		Ga0059261_1679	0.50	-1.3
1,781,971	-		Ga0059261_1679	0.50	-0.1
1,781,971	-		Ga0059261_1679	0.50	+0.2
1,782,048	+		Ga0059261_1679	0.56	-0.0
1,782,048	+		Ga0059261_1679	0.56	+0.0
1,782,048	+		Ga0059261_1679	0.56	-0.3
1,782,048	+		Ga0059261_1679	0.56	+0.6
1,782,048	+		Ga0059261_1679	0.56	-0.4
1,782,048	+		Ga0059261_1679	0.56	+0.5
1,782,048	+		Ga0059261_1679	0.56	-0.3
1,782,048	+		Ga0059261_1679	0.56	+1.3
1,782,049	-		Ga0059261_1679	0.56	+0.0
1,782,049	-				+1.3
1,782,049	-		Ga0059261_1679	0.56	+0.3
1,782,049	-		Ga0059261_1679	0.56	-0.4
1,782,049	-		Ga0059261_1679	0.56	+0.5
1,782,049	-		Ga0059261_1679	0.56	+0.5
1,782,049	-		Ga0059261_1679	0.56	+0.2
1,782,049	-		Ga0059261_1679	0.56	+2.3
1,782,049	-		Ga0059261_1679	0.56	+0.3
1,782,049	-		Ga0059261_1679	0.56	-0.5
1,782,106	+		Ga0059261_1679	0.60	+0.2
1,782,106	+		Ga0059261_1679	0.60	+0.4
1,782,233	+		Ga0059261_1679	0.70	-0.1
1,782,233	+		Ga0059261_1679	0.70	-0.8
1,782,233	+		Ga0059261_1679	0.70	+0.1
1,782,234	-		Ga0059261_1679	0.70	-0.5
1,782,291	+		Ga0059261_1679	0.74	+0.1
1,782,291	+		Ga0059261_1679	0.74	+2.1
1,782,291	+		Ga0059261_1679	0.74	+0.3
1,782,291	+		Ga0059261_1679	0.74	+0.2
1,782,292	-		Ga0059261_1679	0.75	+0.3
1,782,292	-		Ga0059261_1679	0.75	+0.3
1,782,292	-		Ga0059261_1679	0.75	+0.4
1,782,292	-		Ga0059261_1679	0.75	+0.4
1,782,294	+		Ga0059261_1679	0.75	+0.5
1,782,294	+		Ga0059261_1679	0.75	+0.4
1,782,294	+		Ga0059261_1679	0.75	+0.2
1,782,294	+		Ga0059261_1679	0.75	-0.1
1,782,294	+		Ga0059261_1679	0.75	+0.5
1,782,294	+		Ga0059261_1679	0.75	+0.5
1,782,294	+				+1.3
1,782,294	+		Ga0059261_1679	0.75	-0.4
1,782,294	+		Ga0059261_1679	0.75	+0.2
1,782,294	+		Ga0059261_1679	0.75	+0.2
1,782,294	+		Ga0059261_1679	0.75	+1.7
1,782,294	+		Ga0059261_1679	0.75	-0.6
1,782,294	+		Ga0059261_1679	0.75	+0.6
1,782,294	+		Ga0059261_1679	0.75	+0.3
1,782,295	-		Ga0059261_1679	0.75	+0.2
1,782,295	-		Ga0059261_1679	0.75	-0.4
1,782,295	-		Ga0059261_1679	0.75	-0.1
1,782,295	-		Ga0059261_1679	0.75	+0.1
1,782,295	-		Ga0059261_1679	0.75	+0.3
1,782,295	-				+0.3
1,782,295	-		Ga0059261_1679	0.75	+1.3
1,782,295	-				+1.3
1,782,295	-		Ga0059261_1679	0.75	-0.6
1,782,295	-		Ga0059261_1679	0.75	-0.5
1,782,295	-		Ga0059261_1679	0.75	+0.4
1,782,295	-				-0.3
1,782,295	-		Ga0059261_1679	0.75	+0.5
1,782,432	+		Ga0059261_1679	0.85	+1.2
1,782,432	+		Ga0059261_1679	0.85	-0.2
1,782,432	+		Ga0059261_1679	0.85	-0.2
1,782,432	+		Ga0059261_1679	0.85	+0.5
1,782,433	-		Ga0059261_1679	0.86	+0.7
1,782,433	-		Ga0059261_1679	0.86	-0.3
1,782,433	-		Ga0059261_1679	0.86	-0.5
1,782,498	+				-0.4
1,782,499	-				+0.2
1,782,499	-				-0.3
1,782,499	-				-0.9
1,782,499	-				+0.5
1,782,516	+				-1.1
1,782,516	+				+0.5
1,782,516	+				-0.2
1,782,517	-				-0.1
1,782,517	-				+0.3
1,782,517	-				+0.0
1,782,677	+				+0.1
1,782,677	+				-0.1
1,782,677	+				+0.5
1,782,677	+				+1.5
1,782,677	+				+0.5
1,782,677	+				-0.0
1,782,677	+				-0.1
1,782,677	+				-0.1
1,782,677	+				-0.2
1,782,677	+				-0.2
1,782,677	+				+0.3
1,782,678	-				-0.5
1,782,678	-				-0.2
1,782,678	-				-0.5
1,782,678	-				-0.3
1,782,678	-				+1.9
1,782,678	-				+1.9
1,782,678	-				+0.5
1,782,678	-				-0.1
1,782,678	-				-0.6
1,782,678	-				-0.3
1,782,678	-				-0.3
1,782,678	-				-1.0
1,782,678	-				-0.5
1,782,679	+				-0.3
1,782,679	+				-0.8
1,782,679	+				+0.3
1,782,679	+				+0.6
1,782,679	+				-0.6
1,782,679	+				-0.6
1,782,679	+				-0.1
1,782,679	+				+0.6
1,782,679	+				+0.9
1,782,679	+				+0.4
1,782,679	+				-0.2
1,782,679	+				+1.1
1,782,679	+				-0.1
1,782,680	-				-0.3
1,782,680	-				-0.1
1,782,680	-				-0.3
1,782,680	-				-0.6
1,782,680	-				+0.2
1,782,680	-				+0.4
1,782,680	-				-1.0
1,782,680	-				+1.3
1,782,680	-				-0.9
1,782,680	-				+0.5
1,782,694	+				-0.8
1,782,694	+				+1.4
1,782,695	-				-0.2
1,782,695	-				+0.3
1,782,695	-				+0.8
1,782,840	+		Ga0059261_1680	0.14	+0.6
1,782,840	+		Ga0059261_1680	0.14	-2.0
1,782,840	+		Ga0059261_1680	0.14	-0.9
1,782,841	-		Ga0059261_1680	0.14	+0.7
1,782,841	-		Ga0059261_1680	0.14	-0.3
1,782,905	-		Ga0059261_1680	0.19	+0.2
1,782,997	+		Ga0059261_1680	0.25	+0.5
1,782,997	+		Ga0059261_1680	0.25	-0.4
1,782,998	-		Ga0059261_1680	0.25	-0.6
1,782,998	-		Ga0059261_1680	0.25	+0.0
1,782,998	-		Ga0059261_1680	0.25	+0.4
1,782,998	-		Ga0059261_1680	0.25	-0.0
1,783,207	+		Ga0059261_1680	0.40	-0.0
1,783,207	+		Ga0059261_1680	0.40	-0.4
1,783,207	+		Ga0059261_1680	0.40	+0.2
1,783,207	+		Ga0059261_1680	0.40	-0.4
1,783,208	-				+2.9
1,783,208	-		Ga0059261_1680	0.40	+1.0
1,783,208	-				+1.3
1,783,208	-		Ga0059261_1680	0.40	-0.4
1,783,208	-		Ga0059261_1680	0.40	+0.7
1,783,208	-		Ga0059261_1680	0.40	-0.3
1,783,208	-		Ga0059261_1680	0.40	-0.0
1,783,208	-		Ga0059261_1680	0.40	-0.1
1,783,208	-		Ga0059261_1680	0.40	+0.2
1,783,208	-		Ga0059261_1680	0.40	-0.0
1,783,208	-		Ga0059261_1680	0.40	-0.1
1,783,562	+		Ga0059261_1680	0.65	+0.6
1,783,562	+				-1.0
1,783,562	+		Ga0059261_1680	0.65	+0.0
1,783,563	-		Ga0059261_1680	0.65	-0.5
1,783,563	-		Ga0059261_1680	0.65	+0.3
1,784,149	+		Ga0059261_1681	0.10	+2.3
1,784,150	-				+1.3
1,784,150	-		Ga0059261_1681	0.10	-0.7
1,784,150	-		Ga0059261_1681	0.10	+1.1
1,784,160	+		Ga0059261_1681	0.11	-0.0
1,784,160	+		Ga0059261_1681	0.11	+0.8
1,784,160	+		Ga0059261_1681	0.11	+0.5
1,784,172	+		Ga0059261_1681	0.12	-0.4
1,784,172	+		Ga0059261_1681	0.12	+0.2
1,784,172	+		Ga0059261_1681	0.12	+0.4
1,784,172	+		Ga0059261_1681	0.12	-2.4
1,784,172	+				+0.9
1,784,173	-		Ga0059261_1681	0.13	-0.0
1,784,173	-		Ga0059261_1681	0.13	-0.1
1,784,173	-		Ga0059261_1681	0.13	-0.5
1,784,173	-		Ga0059261_1681	0.13	+0.5
1,784,206	+		Ga0059261_1681	0.16	+1.7
1,784,206	+		Ga0059261_1681	0.16	+0.1
1,784,206	+		Ga0059261_1681	0.16	-0.5
1,784,207	-		Ga0059261_1681	0.16	+0.2
1,784,207	-		Ga0059261_1681	0.16	+0.1
1,784,207	-		Ga0059261_1681	0.16	-0.2
1,784,232	+		Ga0059261_1681	0.18	+0.4
1,784,232	+		Ga0059261_1681	0.18	-0.6
1,784,233	-		Ga0059261_1681	0.19	+0.6
1,784,233	-		Ga0059261_1681	0.19	-0.1
1,784,233	-		Ga0059261_1681	0.19	+0.7
1,784,233	-		Ga0059261_1681	0.19	+0.2
1,784,247	+		Ga0059261_1681	0.20	+0.1
1,784,247	+		Ga0059261_1681	0.20	+0.6
1,784,247	+		Ga0059261_1681	0.20	-0.6
1,784,248	-		Ga0059261_1681	0.20	-0.8
1,784,248	-		Ga0059261_1681	0.20	+1.0
1,784,248	-		Ga0059261_1681	0.20	-0.3
1,784,248	-		Ga0059261_1681	0.20	-0.7
1,784,248	-		Ga0059261_1681	0.20	+0.5
1,784,248	-		Ga0059261_1681	0.20	+0.1
1,784,250	+		Ga0059261_1681	0.20	-1.1
1,784,250	+		Ga0059261_1681	0.20	-1.8
1,784,250	+		Ga0059261_1681	0.20	+0.7
1,784,250	+		Ga0059261_1681	0.20	-0.3
1,784,250	+		Ga0059261_1681	0.20	+0.5
1,784,250	+		Ga0059261_1681	0.20	+0.3
1,784,250	+		Ga0059261_1681	0.20	-1.3
1,784,250	+		Ga0059261_1681	0.20	-0.4
1,784,250	+		Ga0059261_1681	0.20	-0.9
1,784,251	-		Ga0059261_1681	0.20	+1.0
1,784,251	-		Ga0059261_1681	0.20	+0.3
1,784,251	-		Ga0059261_1681	0.20	+0.4
1,784,251	-		Ga0059261_1681	0.20	-0.2
1,784,251	-		Ga0059261_1681	0.20	-0.2
1,784,251	-		Ga0059261_1681	0.20	+1.7
1,784,251	-		Ga0059261_1681	0.20	-0.7
1,784,251	-		Ga0059261_1681	0.20	+0.6
1,784,251	-		Ga0059261_1681	0.20	-0.0
1,784,265	+		Ga0059261_1681	0.22	+0.7
1,784,265	+		Ga0059261_1681	0.22	+0.1
1,784,265	+		Ga0059261_1681	0.22	-1.0
1,784,265	+		Ga0059261_1681	0.22	+0.8
1,784,265	+		Ga0059261_1681	0.22	+0.4
1,784,265	+		Ga0059261_1681	0.22	+0.2
1,784,266	-		Ga0059261_1681	0.22	+0.2
1,784,266	-		Ga0059261_1681	0.22	-1.4
1,784,266	-		Ga0059261_1681	0.22	+0.7
1,784,266	-		Ga0059261_1681	0.22	-0.4
1,784,266	-		Ga0059261_1681	0.22	+0.8
1,784,343	+		Ga0059261_1681	0.30	+0.5
1,784,343	+		Ga0059261_1681	0.30	+0.4
1,784,344	-		Ga0059261_1681	0.30	-0.2
1,784,475	+		Ga0059261_1681	0.43	+0.3
1,784,476	-		Ga0059261_1681	0.43	+0.8
1,784,476	-		Ga0059261_1681	0.43	+0.2
1,784,476	-		Ga0059261_1681	0.43	-1.0
1,784,476	-		Ga0059261_1681	0.43	-0.4
1,784,636	+		Ga0059261_1681	0.59	+2.3
1,784,636	+		Ga0059261_1681	0.59	-0.0
1,784,636	+		Ga0059261_1681	0.59	+1.2
1,784,636	+		Ga0059261_1681	0.59	-0.6
1,784,637	-		Ga0059261_1681	0.59	+0.9
1,784,637	-		Ga0059261_1681	0.59	+1.3
1,784,637	-		Ga0059261_1681	0.59	+0.2
1,784,637	-		Ga0059261_1681	0.59	-0.5
1,784,733	+		Ga0059261_1681	0.69	+1.3
1,784,734	-		Ga0059261_1681	0.69	+0.2
1,784,734	-		Ga0059261_1681	0.69	-0.3
1,784,734	-		Ga0059261_1681	0.69	+0.4
1,784,734	-		Ga0059261_1681	0.69	+0.6
1,784,793	+		Ga0059261_1681	0.75	+0.1
1,784,868	+		Ga0059261_1681	0.82	-1.6
1,784,868	+		Ga0059261_1681	0.82	-0.3
1,784,868	+		Ga0059261_1681	0.82	+0.9
1,784,868	+		Ga0059261_1681	0.82	-0.0
1,784,868	+		Ga0059261_1681	0.82	-0.0
1,784,868	+		Ga0059261_1681	0.82	+0.2
1,784,869	-		Ga0059261_1681	0.82	-0.2
1,784,869	-		Ga0059261_1681	0.82	-0.7
1,784,869	-		Ga0059261_1681	0.82	+0.1
1,784,869	-		Ga0059261_1681	0.82	-0.7
1,784,869	-		Ga0059261_1681	0.82	-0.5
1,784,956	-				-0.0