Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1651

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,740,190	+		Ga0059261_1650	0.28	-1.2
1,740,190	+		Ga0059261_1650	0.28	+0.2
1,740,190	+		Ga0059261_1650	0.28	-0.1
1,740,191	-		Ga0059261_1650	0.28	-0.2
1,740,263	-		Ga0059261_1650	0.34	+0.1
1,740,439	+		Ga0059261_1650	0.47	-0.0
1,740,478	+		Ga0059261_1650	0.50	+0.4
1,740,478	+		Ga0059261_1650	0.50	-0.2
1,740,478	+		Ga0059261_1650	0.50	+0.3
1,740,479	-		Ga0059261_1650	0.50	+0.1
1,740,479	-		Ga0059261_1650	0.50	+0.1
1,740,479	-		Ga0059261_1650	0.50	-0.9
1,740,479	-		Ga0059261_1650	0.50	-0.4
1,740,571	+		Ga0059261_1650	0.56	+1.1
1,740,571	+		Ga0059261_1650	0.56	-0.4
1,740,571	+		Ga0059261_1650	0.56	-0.1
1,740,571	+		Ga0059261_1650	0.56	+0.2
1,740,571	+		Ga0059261_1650	0.56	-0.1
1,740,571	+		Ga0059261_1650	0.56	-0.5
1,740,571	+		Ga0059261_1650	0.56	+0.2
1,740,571	+		Ga0059261_1650	0.56	+0.6
1,740,571	+		Ga0059261_1650	0.56	-0.2
1,740,571	+		Ga0059261_1650	0.56	+0.4
1,740,571	+		Ga0059261_1650	0.56	-0.2
1,740,571	+		Ga0059261_1650	0.56	-0.9
1,740,571	+		Ga0059261_1650	0.56	+0.1
1,740,571	+		Ga0059261_1650	0.56	-0.6
1,740,572	-		Ga0059261_1650	0.57	-0.3
1,740,572	-		Ga0059261_1650	0.57	+0.0
1,740,572	-		Ga0059261_1650	0.57	-1.4
1,740,572	-		Ga0059261_1650	0.57	+0.4
1,740,572	-		Ga0059261_1650	0.57	-0.1
1,740,572	-		Ga0059261_1650	0.57	-1.7
1,740,572	-		Ga0059261_1650	0.57	-0.3
1,740,572	-		Ga0059261_1650	0.57	+0.8
1,740,572	-		Ga0059261_1650	0.57	-0.8
1,740,572	-		Ga0059261_1650	0.57	+0.9
1,740,572	-		Ga0059261_1650	0.57	+0.7
1,740,638	+		Ga0059261_1650	0.61	-0.8
1,740,638	+		Ga0059261_1650	0.61	+0.1
1,740,638	+		Ga0059261_1650	0.61	-1.5
1,740,638	+		Ga0059261_1650	0.61	-0.6
1,740,638	+		Ga0059261_1650	0.61	-1.7
1,740,638	+		Ga0059261_1650	0.61	+0.3
1,740,638	+		Ga0059261_1650	0.61	+0.3
1,740,638	+				-0.3
1,740,638	+				+2.3
1,740,639	-		Ga0059261_1650	0.62	+0.2
1,740,639	-		Ga0059261_1650	0.62	-0.3
1,740,639	-		Ga0059261_1650	0.62	-0.2
1,740,639	-		Ga0059261_1650	0.62	-0.2
1,740,640	+		Ga0059261_1650	0.62	-0.9
1,740,640	+		Ga0059261_1650	0.62	+0.5
1,740,640	+		Ga0059261_1650	0.62	+0.4
1,740,640	+				+1.3
1,740,640	+		Ga0059261_1650	0.62	+0.2
1,740,640	+		Ga0059261_1650	0.62	+0.6
1,740,640	+		Ga0059261_1650	0.62	-0.1
1,740,640	+		Ga0059261_1650	0.62	+0.1
1,740,641	-		Ga0059261_1650	0.62	-0.2
1,740,641	-		Ga0059261_1650	0.62	-0.7
1,740,641	-				-0.3
1,740,641	-		Ga0059261_1650	0.62	-0.4
1,740,641	-		Ga0059261_1650	0.62	-0.4
1,740,641	-				+2.3
1,740,641	-		Ga0059261_1650	0.62	+0.3
1,740,641	-		Ga0059261_1650	0.62	-0.2
1,740,646	+		Ga0059261_1650	0.62	+0.7
1,740,646	+		Ga0059261_1650	0.62	+0.5
1,740,646	+		Ga0059261_1650	0.62	-1.2
1,740,646	+		Ga0059261_1650	0.62	-0.8
1,740,646	+		Ga0059261_1650	0.62	+0.0
1,740,646	+		Ga0059261_1650	0.62	-0.1
1,740,646	+		Ga0059261_1650	0.62	+0.7
1,740,647	-		Ga0059261_1650	0.62	+0.1
1,740,647	-		Ga0059261_1650	0.62	-0.8
1,740,647	-				-0.3
1,740,647	-		Ga0059261_1650	0.62	+0.2
1,740,647	-		Ga0059261_1650	0.62	-0.2
1,740,685	+		Ga0059261_1650	0.65	-0.0
1,740,733	+				+0.3
1,740,733	+		Ga0059261_1650	0.68	-0.6
1,740,733	+				-0.7
1,740,733	+		Ga0059261_1650	0.68	+0.0
1,740,734	-		Ga0059261_1650	0.69	-0.2
1,740,734	-		Ga0059261_1650	0.69	-1.0
1,740,734	-		Ga0059261_1650	0.69	+0.3
1,740,734	-		Ga0059261_1650	0.69	+0.4
1,740,734	-		Ga0059261_1650	0.69	-0.2
1,740,817	+		Ga0059261_1650	0.75	-0.1
1,740,818	-		Ga0059261_1650	0.75	-0.1
1,740,838	+		Ga0059261_1650	0.76	-0.4
1,740,838	+		Ga0059261_1650	0.76	+0.2
1,740,838	+		Ga0059261_1650	0.76	+0.9
1,740,838	+		Ga0059261_1650	0.76	-0.6
1,740,839	-		Ga0059261_1650	0.76	+0.0
1,740,839	-		Ga0059261_1650	0.76	+1.0
1,740,839	-		Ga0059261_1650	0.76	-0.0
1,740,839	-		Ga0059261_1650	0.76	-0.3
1,740,839	-		Ga0059261_1650	0.76	-0.4
1,740,839	-		Ga0059261_1650	0.76	+0.0
1,740,839	-		Ga0059261_1650	0.76	+0.2
1,740,931	+		Ga0059261_1650	0.83	-1.0
1,740,931	+				+0.6
1,740,931	+		Ga0059261_1650	0.83	+1.3
1,740,932	-		Ga0059261_1650	0.83	-0.1
1,740,932	-		Ga0059261_1650	0.83	+0.2
1,740,932	-		Ga0059261_1650	0.83	+0.9
1,740,932	-		Ga0059261_1650	0.83	-1.4
1,740,932	-		Ga0059261_1650	0.83	+0.5
1,741,373	-				-0.8
1,741,380	+				+0.3
1,741,380	+				-0.0
1,741,380	+				-0.3
1,741,381	-				-0.4
1,741,381	-				+0.4
1,741,381	-				+1.3
1,741,439	-				+0.4
1,741,439	-				-0.1
1,741,439	-				+0.3
1,741,440	+				+0.7
1,741,440	+				-0.3
1,741,440	+				+0.5
1,741,440	+				-0.8
1,741,440	+				+0.6
1,741,441	-				-0.2
1,741,441	-				+0.3
1,741,441	-				+0.1
1,741,441	-				+0.1
1,741,441	-				+0.1
1,741,441	-				-0.1
1,741,441	-				-0.6
1,741,455	+				+1.3
1,741,455	+				-0.2
1,741,456	-				-0.5
1,741,456	-				+1.3
1,741,456	-				-0.5
1,741,456	-				-0.1
1,741,456	-				-0.3
1,741,494	+		Ga0059261_1651	0.11	+0.5
1,741,494	+		Ga0059261_1651	0.11	+0.0
1,741,494	+		Ga0059261_1651	0.11	-0.7
1,741,494	+		Ga0059261_1651	0.11	-0.3
1,741,494	+		Ga0059261_1651	0.11	+0.7
1,741,494	+		Ga0059261_1651	0.11	+0.5
1,741,495	-		Ga0059261_1651	0.11	-0.4
1,741,495	-		Ga0059261_1651	0.11	-0.0
1,741,495	-		Ga0059261_1651	0.11	-1.9
1,741,495	-		Ga0059261_1651	0.11	-0.6
1,741,495	-		Ga0059261_1651	0.11	+0.0
1,741,495	-		Ga0059261_1651	0.11	-0.1
1,741,495	-		Ga0059261_1651	0.11	-0.2
1,741,495	-		Ga0059261_1651	0.11	-1.4
1,741,617	+		Ga0059261_1651	0.15	+0.7
1,741,617	+		Ga0059261_1651	0.15	+0.2
1,741,617	+		Ga0059261_1651	0.15	-0.6
1,741,617	+		Ga0059261_1651	0.15	-1.7
1,741,617	+		Ga0059261_1651	0.15	+0.3
1,741,618	-		Ga0059261_1651	0.15	+0.6
1,741,618	-		Ga0059261_1651	0.15	-0.2
1,741,618	-		Ga0059261_1651	0.15	-0.0
1,741,618	-		Ga0059261_1651	0.15	-0.4
1,741,668	+		Ga0059261_1651	0.17	-0.5
1,741,669	-		Ga0059261_1651	0.17	+0.0
1,741,857	+		Ga0059261_1651	0.23	-2.0
1,741,857	+		Ga0059261_1651	0.23	+1.3
1,741,857	+		Ga0059261_1651	0.23	-0.5
1,741,857	+		Ga0059261_1651	0.23	-0.3
1,741,857	+		Ga0059261_1651	0.23	-0.1
1,741,857	+		Ga0059261_1651	0.23	+1.0
1,741,857	+		Ga0059261_1651	0.23	+0.1
1,741,858	-		Ga0059261_1651	0.23	-0.2
1,741,858	-		Ga0059261_1651	0.23	-0.0
1,741,858	-		Ga0059261_1651	0.23	+0.1
1,741,858	-		Ga0059261_1651	0.23	+0.1
1,741,858	-		Ga0059261_1651	0.23	-0.0
1,741,858	-		Ga0059261_1651	0.23	-0.2
1,741,860	+		Ga0059261_1651	0.23	-0.3
1,741,860	+		Ga0059261_1651	0.23	+2.3
1,741,860	+		Ga0059261_1651	0.23	+1.2
1,741,860	+		Ga0059261_1651	0.23	-0.0
1,741,861	-		Ga0059261_1651	0.24	-0.1
1,741,861	-		Ga0059261_1651	0.24	-0.3
1,741,925	-		Ga0059261_1651	0.26	+0.1
1,741,925	-		Ga0059261_1651	0.26	+1.0
1,741,925	-		Ga0059261_1651	0.26	-1.0
1,741,980	+		Ga0059261_1651	0.28	-0.9
1,741,980	+		Ga0059261_1651	0.28	-0.1
1,741,981	-		Ga0059261_1651	0.28	+0.7
1,741,981	-		Ga0059261_1651	0.28	+0.1
1,742,038	+		Ga0059261_1651	0.30	+0.5
1,742,039	-		Ga0059261_1651	0.30	-0.7
1,742,122	-		Ga0059261_1651	0.33	-0.1
1,742,166	+		Ga0059261_1651	0.34	-1.0
1,742,166	+		Ga0059261_1651	0.34	+0.3
1,742,166	+		Ga0059261_1651	0.34	-0.6
1,742,166	+		Ga0059261_1651	0.34	+0.1
1,742,166	+		Ga0059261_1651	0.34	-0.4
1,742,166	+		Ga0059261_1651	0.34	-0.7
1,742,166	+		Ga0059261_1651	0.34	-0.2
1,742,167	-		Ga0059261_1651	0.34	-0.4
1,742,167	-		Ga0059261_1651	0.34	+0.4
1,742,167	-		Ga0059261_1651	0.34	+0.6
1,742,176	+		Ga0059261_1651	0.35	+0.5
1,742,177	-		Ga0059261_1651	0.35	-0.1
1,742,280	+		Ga0059261_1651	0.38	-1.0
1,742,280	+		Ga0059261_1651	0.38	-0.3
1,742,280	+		Ga0059261_1651	0.38	+0.1
1,742,281	-		Ga0059261_1651	0.38	-0.4
1,742,328	+		Ga0059261_1651	0.40	-1.1
1,742,328	+		Ga0059261_1651	0.40	+0.4
1,742,329	-		Ga0059261_1651	0.40	-0.3
1,742,329	-		Ga0059261_1651	0.40	-0.4
1,742,329	-		Ga0059261_1651	0.40	-0.2
1,742,329	-		Ga0059261_1651	0.40	-0.3
1,742,329	-		Ga0059261_1651	0.40	-0.4
1,742,329	-		Ga0059261_1651	0.40	-0.3
1,742,475	+		Ga0059261_1651	0.45	+0.3
1,742,475	+		Ga0059261_1651	0.45	+0.1
1,742,475	+		Ga0059261_1651	0.45	+0.6
1,742,475	+		Ga0059261_1651	0.45	+1.0
1,742,475	+		Ga0059261_1651	0.45	-0.2
1,742,475	+		Ga0059261_1651	0.45	-0.8
1,742,476	-		Ga0059261_1651	0.45	-0.1
1,742,476	-		Ga0059261_1651	0.45	+0.1
1,742,476	-		Ga0059261_1651	0.45	-0.4
1,742,476	-		Ga0059261_1651	0.45	+0.1
1,742,476	-		Ga0059261_1651	0.45	+0.5
1,742,476	-		Ga0059261_1651	0.45	-0.2
1,742,622	+		Ga0059261_1651	0.50	+0.1
1,742,622	+		Ga0059261_1651	0.50	+0.3
1,742,622	+		Ga0059261_1651	0.50	-0.1
1,742,622	+		Ga0059261_1651	0.50	-0.1
1,742,622	+				-0.0
1,742,623	-		Ga0059261_1651	0.50	+0.7
1,742,623	-		Ga0059261_1651	0.50	-0.5
1,742,623	-		Ga0059261_1651	0.50	-1.9
1,742,623	-		Ga0059261_1651	0.50	-2.2
1,742,623	-		Ga0059261_1651	0.50	-0.4
1,742,623	-		Ga0059261_1651	0.50	-0.2
1,742,623	-		Ga0059261_1651	0.50	-0.3
1,742,664	+		Ga0059261_1651	0.52	-0.2
1,742,664	+		Ga0059261_1651	0.52	+0.1
1,742,664	+		Ga0059261_1651	0.52	+0.0
1,742,664	+		Ga0059261_1651	0.52	+0.3
1,742,664	+		Ga0059261_1651	0.52	+0.4
1,742,665	-		Ga0059261_1651	0.52	+0.0
1,742,665	-				-0.3
1,742,676	+		Ga0059261_1651	0.52	-0.4
1,742,676	+		Ga0059261_1651	0.52	-1.7
1,742,682	+		Ga0059261_1651	0.52	+0.7
1,742,682	+		Ga0059261_1651	0.52	+0.1
1,742,683	-		Ga0059261_1651	0.52	+1.0
1,742,683	-		Ga0059261_1651	0.52	-0.3
1,742,683	-		Ga0059261_1651	0.52	-1.0
1,742,685	+		Ga0059261_1651	0.52	-0.3
1,742,685	+		Ga0059261_1651	0.52	+1.5
1,742,685	+		Ga0059261_1651	0.52	-0.3
1,742,685	+		Ga0059261_1651	0.52	-0.1
1,742,685	+		Ga0059261_1651	0.52	-0.2
1,742,686	-		Ga0059261_1651	0.52	+0.3
1,742,686	-		Ga0059261_1651	0.52	+0.3
1,742,686	-		Ga0059261_1651	0.52	-0.1
1,742,686	-		Ga0059261_1651	0.52	+0.5
1,742,686	-		Ga0059261_1651	0.52	+0.8
1,742,686	-		Ga0059261_1651	0.52	-0.7
1,742,686	-		Ga0059261_1651	0.52	-0.0
1,742,881	-		Ga0059261_1651	0.59	+0.1
1,742,881	-		Ga0059261_1651	0.59	+0.8
1,742,898	-		Ga0059261_1651	0.60	-0.4
1,742,900	-		Ga0059261_1651	0.60	-0.4
1,742,900	-		Ga0059261_1651	0.60	-1.8
1,742,900	-		Ga0059261_1651	0.60	+0.0
1,742,928	+		Ga0059261_1651	0.61	-0.2
1,742,928	+		Ga0059261_1651	0.61	+0.2
1,742,929	-				+1.7
1,742,929	-		Ga0059261_1651	0.61	-0.0
1,742,994	+		Ga0059261_1651	0.63	+0.1
1,743,029	+		Ga0059261_1651	0.64	+0.6
1,743,030	-		Ga0059261_1651	0.64	+0.3
1,743,088	+		Ga0059261_1651	0.66	+0.1
1,743,088	+		Ga0059261_1651	0.66	-1.8
1,743,089	-		Ga0059261_1651	0.66	-0.5
1,743,089	-		Ga0059261_1651	0.66	-0.6
1,743,135	+		Ga0059261_1651	0.68	-1.3
1,743,136	-		Ga0059261_1651	0.68	-1.7
1,743,213	+		Ga0059261_1651	0.71	-0.7
1,743,213	+		Ga0059261_1651	0.71	-0.6
1,743,213	+		Ga0059261_1651	0.71	-1.0
1,743,213	+		Ga0059261_1651	0.71	+0.8
1,743,213	+				+0.3
1,743,214	-		Ga0059261_1651	0.71	+0.5
1,743,214	-		Ga0059261_1651	0.71	-0.5
1,743,214	-		Ga0059261_1651	0.71	+0.4
1,743,214	-		Ga0059261_1651	0.71	-1.0
1,743,214	-		Ga0059261_1651	0.71	-0.9
1,743,214	-		Ga0059261_1651	0.71	-0.4
1,743,364	+		Ga0059261_1651	0.76	-0.8
1,743,365	-		Ga0059261_1651	0.76	-0.2
1,743,365	-		Ga0059261_1651	0.76	-0.2
1,743,491	+		Ga0059261_1651	0.80	-0.6
1,743,492	-		Ga0059261_1651	0.80	+0.2
1,743,492	-		Ga0059261_1651	0.80	+0.5
1,743,492	-		Ga0059261_1651	0.80	+0.1
1,743,492	-				+2.3
1,743,552	+		Ga0059261_1651	0.83	-0.2
1,743,581	-		Ga0059261_1651	0.84	-0.1
1,743,651	+		Ga0059261_1651	0.86	-0.5
1,743,652	-		Ga0059261_1651	0.86	-0.2
1,743,652	-		Ga0059261_1651	0.86	-0.7
1,743,652	-		Ga0059261_1651	0.86	-0.7
1,743,652	-		Ga0059261_1651	0.86	-0.2
1,743,687	+		Ga0059261_1651	0.87	-0.4
1,743,687	+		Ga0059261_1651	0.87	+0.3
1,743,687	+		Ga0059261_1651	0.87	+1.1
1,743,687	+		Ga0059261_1651	0.87	-0.2
1,743,688	-		Ga0059261_1651	0.87	-0.3
1,743,688	-		Ga0059261_1651	0.87	+0.3
1,744,031	-				+0.1
1,744,068	-				-0.4
1,744,093	+				-0.6
1,744,094	-				+0.2
1,744,094	-				-1.0
1,744,094	-				-0.4
1,744,094	-				+0.6
1,744,096	-				-1.1
1,744,132	+				-0.2
1,744,133	-				+0.4
1,744,274	+				-0.4
1,744,274	+				-0.4
1,744,274	+				+1.3