Experiment: L-Alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27625 and BWI76_RS27630 are separated by 1 nucleotides BWI76_RS27630 and BWI76_RS27635 overlap by 4 nucleotides BWI76_RS27635 and BWI76_RS27640 are separated by 14 nucleotides BWI76_RS27640 and BWI76_RS27645 are separated by 169 nucleotides
BWI76_RS27625: BWI76_RS27625 - NADPH:quinone reductase, at 5,733,114 to 5,734,121
_RS27625
BWI76_RS27630: BWI76_RS27630 - antibiotic biosynthesis monooxygenase, at 5,734,123 to 5,734,461
_RS27630
BWI76_RS27635: BWI76_RS27635 - AraC family transcriptional regulator, at 5,734,458 to 5,735,411
_RS27635
BWI76_RS27640: BWI76_RS27640 - hypothetical protein, at 5,735,426 to 5,736,205
_RS27640
BWI76_RS27645: BWI76_RS27645 - ADP-ribose pyrophosphatase, at 5,736,375 to 5,736,929
_RS27645
Position (kb) 5734
5735
5736 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5733.469 kb on - strand, within BWI76_RS27625 at 5733.532 kb on + strand, within BWI76_RS27625 at 5733.830 kb on + strand, within BWI76_RS27625 at 5733.870 kb on - strand, within BWI76_RS27625 at 5733.905 kb on - strand, within BWI76_RS27625 at 5733.924 kb on + strand, within BWI76_RS27625 at 5734.115 kb on + strand at 5734.123 kb on - strand at 5734.160 kb on + strand, within BWI76_RS27630 at 5734.163 kb on - strand, within BWI76_RS27630 at 5734.163 kb on - strand, within BWI76_RS27630 at 5734.163 kb on - strand, within BWI76_RS27630 at 5734.307 kb on + strand, within BWI76_RS27630 at 5734.436 kb on + strand at 5734.477 kb on + strand at 5734.498 kb on - strand at 5734.533 kb on + strand at 5734.567 kb on - strand, within BWI76_RS27635 at 5734.585 kb on + strand, within BWI76_RS27635 at 5735.074 kb on - strand, within BWI76_RS27635 at 5735.090 kb on + strand, within BWI76_RS27635 at 5735.145 kb on + strand, within BWI76_RS27635 at 5735.348 kb on + strand at 5735.366 kb on + strand at 5735.395 kb on + strand at 5735.503 kb on + strand at 5735.533 kb on - strand, within BWI76_RS27640 at 5735.674 kb on + strand, within BWI76_RS27640 at 5735.830 kb on - strand, within BWI76_RS27640 at 5735.835 kb on - strand, within BWI76_RS27640 at 5735.928 kb on + strand, within BWI76_RS27640 at 5735.955 kb on + strand, within BWI76_RS27640 at 5735.955 kb on + strand, within BWI76_RS27640 at 5736.003 kb on - strand, within BWI76_RS27640 at 5736.180 kb on - strand at 5736.188 kb on - strand at 5736.347 kb on - strand at 5736.361 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (C) remove 5,733,469 - BWI76_RS27625 0.35 -0.1 5,733,532 + BWI76_RS27625 0.41 -0.1 5,733,830 + BWI76_RS27625 0.71 +0.6 5,733,870 - BWI76_RS27625 0.75 +0.4 5,733,905 - BWI76_RS27625 0.78 +0.7 5,733,924 + BWI76_RS27625 0.80 -0.1 5,734,115 + +1.9 5,734,123 - -0.5 5,734,160 + BWI76_RS27630 0.11 -0.7 5,734,163 - BWI76_RS27630 0.12 +0.6 5,734,163 - BWI76_RS27630 0.12 -0.2 5,734,163 - BWI76_RS27630 0.12 +0.4 5,734,307 + BWI76_RS27630 0.54 +0.6 5,734,436 + +0.0 5,734,477 + +1.4 5,734,498 - +0.6 5,734,533 + -0.2 5,734,567 - BWI76_RS27635 0.11 +1.6 5,734,585 + BWI76_RS27635 0.13 +0.3 5,735,074 - BWI76_RS27635 0.65 +2.6 5,735,090 + BWI76_RS27635 0.66 +1.0 5,735,145 + BWI76_RS27635 0.72 -2.0 5,735,348 + -0.7 5,735,366 + -0.0 5,735,395 + -0.7 5,735,503 + -0.3 5,735,533 - BWI76_RS27640 0.14 +0.5 5,735,674 + BWI76_RS27640 0.32 -0.3 5,735,830 - BWI76_RS27640 0.52 -1.0 5,735,835 - BWI76_RS27640 0.52 +0.8 5,735,928 + BWI76_RS27640 0.64 -0.0 5,735,955 + BWI76_RS27640 0.68 -0.6 5,735,955 + BWI76_RS27640 0.68 +0.5 5,736,003 - BWI76_RS27640 0.74 -0.8 5,736,180 - -0.5 5,736,188 - +1.0 5,736,347 - +0.3 5,736,361 - +0.1
Or see this region's nucleotide sequence