Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_25970

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
5,869,112	+		AO356_25960	0.86	-0.1
5,869,149	-		AO356_25960	0.89	+0.1
5,869,178	+				+0.3
5,869,179	-				-0.2
5,869,298	+				+0.2
5,869,882	+				+0.1
5,869,882	+				-0.8
5,869,883	-				-0.7
5,869,883	-				-1.0
5,870,166	+		AO356_25970	0.28	+0.1
5,870,166	+		AO356_25970	0.28	-0.2
5,870,166	+		AO356_25970	0.28	+0.6
5,870,166	+		AO356_25970	0.28	+0.7
5,870,167	-		AO356_25970	0.28	+0.3
5,870,167	-		AO356_25970	0.28	+0.4
5,870,177	+		AO356_25970	0.30	+1.3
5,870,177	+		AO356_25970	0.30	-0.5
5,870,178	-		AO356_25970	0.30	+0.4
5,870,178	-		AO356_25970	0.30	+0.9
5,870,213	+		AO356_25970	0.34	+1.1
5,870,214	-		AO356_25970	0.34	+0.4
5,870,214	-		AO356_25970	0.34	+0.7
5,870,214	-		AO356_25970	0.34	+0.3
5,870,238	+		AO356_25970	0.36	+0.6
5,870,238	+		AO356_25970	0.36	-0.1
5,870,591	+		AO356_25970	0.76	+0.3
5,870,591	+		AO356_25970	0.76	+0.1
5,870,591	+		AO356_25970	0.76	-0.2
5,870,592	-		AO356_25970	0.76	-0.6
5,870,592	-		AO356_25970	0.76	+0.1
5,870,804	+				-0.4
5,870,832	+				-0.3
5,870,832	+				+1.3
5,870,832	+				+1.1
5,870,832	+				+0.8
5,870,832	+				+0.4
5,870,833	-				+0.2
5,870,833	-				-0.5
5,871,138	-		AO356_25975	0.19	+0.5
5,871,141	+		AO356_25975	0.20	-1.1
5,871,211	-		AO356_25975	0.24	+0.6
5,871,252	+		AO356_25975	0.26	-0.4
5,871,253	-		AO356_25975	0.27	-0.1
5,871,253	-		AO356_25975	0.27	-0.1
5,871,340	-		AO356_25975	0.32	+0.8
5,871,729	+		AO356_25975	0.56	-0.3
5,871,729	+		AO356_25975	0.56	+0.3
5,871,729	+		AO356_25975	0.56	-0.3
5,871,730	-		AO356_25975	0.56	-0.5
5,871,730	-		AO356_25975	0.56	+0.1
5,871,730	-		AO356_25975	0.56	-0.3