Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_25960

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
5,866,974	+		AO356_25955	0.12	-1.2
5,866,974	+		AO356_25955	0.12	-0.2
5,866,975	-		AO356_25955	0.12	+0.6
5,866,975	-		AO356_25955	0.12	-0.4
5,866,975	-		AO356_25955	0.12	-0.2
5,866,975	-		AO356_25955	0.12	-0.4
5,867,020	-		AO356_25955	0.18	-1.4
5,867,020	-		AO356_25955	0.18	-0.5
5,867,079	+		AO356_25955	0.27	+0.5
5,867,079	+		AO356_25955	0.27	-0.7
5,867,191	-		AO356_25955	0.44	+0.2
5,867,252	-		AO356_25955	0.53	-0.2
5,867,271	+		AO356_25955	0.56	-0.5
5,867,272	-		AO356_25955	0.56	-0.3
5,867,436	+		AO356_25955	0.80	+1.4
5,867,436	+		AO356_25955	0.80	-0.4
5,867,437	-		AO356_25955	0.81	-0.9
5,867,475	+		AO356_25955	0.86	+1.0
5,867,475	+		AO356_25955	0.86	+0.4
5,867,475	+		AO356_25955	0.86	-0.1
5,867,476	-		AO356_25955	0.86	+0.9
5,867,476	-		AO356_25955	0.86	+0.3
5,867,476	-		AO356_25955	0.86	+0.6
5,867,476	-		AO356_25955	0.86	-0.6
5,867,499	+		AO356_25955	0.90	+0.9
5,867,499	+		AO356_25955	0.90	-1.1
5,867,499	+		AO356_25955	0.90	-0.5
5,867,500	-				+1.2
5,867,503	+				+0.2
5,867,504	-				-0.3
5,867,504	-				+0.6
5,867,511	+				-0.8
5,867,511	+				+0.3
5,867,511	+				-0.9
5,867,511	+				-0.0
5,867,512	-				+0.3
5,867,512	-				+1.0
5,867,676	+				-0.7
5,867,676	+				+1.1
5,867,677	-				+1.1
5,867,685	+				-0.9
5,867,685	+				+0.2
5,867,686	-				-0.6
5,867,686	-				+1.4
5,867,686	-				-1.1
5,867,686	-				+0.6
5,867,686	-				-0.5
5,867,686	-				+0.2
5,867,691	+				-0.1
5,867,691	+				+0.4
5,867,691	+				-1.3
5,867,691	+				+0.7
5,867,691	+				+0.8
5,867,691	+				+1.6
5,867,691	+				-0.6
5,867,691	+				-1.0
5,867,692	-				-0.5
5,867,692	-				+0.1
5,867,707	+				-0.5
5,867,708	-				-0.2
5,867,743	-				+0.4
5,867,770	+				+1.1
5,867,771	-				+0.3
5,867,771	-				+0.4
5,867,878	+				-0.2
5,867,936	+				+0.9
5,867,946	+				-0.9
5,867,946	+				-0.3
5,867,946	+				+0.2
5,867,947	-				+0.5
5,868,000	+				-0.4
5,868,000	+				-0.9
5,868,001	-				-1.4
5,868,068	+				+0.5
5,868,069	-				-1.4
5,868,194	+		AO356_25960	0.18	-0.4
5,868,195	-		AO356_25960	0.18	+0.3
5,868,215	+		AO356_25960	0.20	+0.3
5,868,215	+		AO356_25960	0.20	+0.3
5,868,216	-		AO356_25960	0.20	-0.2
5,868,216	-		AO356_25960	0.20	-0.9
5,868,216	-		AO356_25960	0.20	-1.8
5,868,253	-		AO356_25960	0.22	+0.0
5,868,279	-		AO356_25960	0.24	+0.1
5,868,279	-		AO356_25960	0.24	-0.3
5,868,300	-		AO356_25960	0.26	-2.2
5,868,300	-		AO356_25960	0.26	+0.5
5,868,373	+		AO356_25960	0.31	+0.8
5,868,373	+		AO356_25960	0.31	-1.1
5,868,398	+		AO356_25960	0.33	+0.3
5,868,398	+		AO356_25960	0.33	+0.3
5,868,399	-		AO356_25960	0.33	+0.8
5,868,413	+		AO356_25960	0.34	-0.1
5,868,413	+		AO356_25960	0.34	-0.3
5,868,413	+		AO356_25960	0.34	-0.3
5,868,413	+		AO356_25960	0.34	-0.1
5,868,414	-		AO356_25960	0.34	+1.6
5,868,414	-		AO356_25960	0.34	+0.0
5,868,414	-		AO356_25960	0.34	-0.0
5,868,414	-		AO356_25960	0.34	+0.5
5,868,414	-		AO356_25960	0.34	-0.8
5,868,414	-		AO356_25960	0.34	+0.1
5,868,421	+		AO356_25960	0.35	+0.5
5,868,423	+		AO356_25960	0.35	-0.4
5,868,423	+		AO356_25960	0.35	-0.8
5,868,424	-		AO356_25960	0.35	+0.2
5,868,424	-		AO356_25960	0.35	-0.9
5,868,424	-		AO356_25960	0.35	-1.1
5,868,431	+		AO356_25960	0.36	+0.3
5,868,432	-		AO356_25960	0.36	-0.0
5,868,432	-		AO356_25960	0.36	-1.3
5,868,481	+		AO356_25960	0.39	+0.7
5,868,481	+		AO356_25960	0.39	-0.2
5,868,482	-		AO356_25960	0.39	+0.8
5,868,543	+		AO356_25960	0.44	-1.4
5,868,543	+		AO356_25960	0.44	+0.3
5,868,544	-		AO356_25960	0.44	-0.3
5,868,544	-		AO356_25960	0.44	+0.4
5,868,544	-		AO356_25960	0.44	-0.4
5,868,544	-		AO356_25960	0.44	-0.9
5,868,634	+		AO356_25960	0.51	-0.0
5,868,635	-		AO356_25960	0.51	+0.2
5,868,716	+		AO356_25960	0.57	-1.0
5,868,796	-		AO356_25960	0.63	-0.4
5,868,796	-		AO356_25960	0.63	+0.5
5,868,811	+		AO356_25960	0.64	+0.1
5,868,811	+		AO356_25960	0.64	-0.8
5,868,811	+		AO356_25960	0.64	+0.3
5,868,812	-		AO356_25960	0.64	-0.0
5,869,112	+		AO356_25960	0.86	-0.1
5,869,149	-		AO356_25960	0.89	+0.1
5,869,178	+				+0.3
5,869,179	-				-0.2
5,869,298	+				+0.2
5,869,882	+				+0.1
5,869,882	+				-0.8
5,869,883	-				-0.7
5,869,883	-				-1.0
5,870,166	+		AO356_25970	0.28	+0.1
5,870,166	+		AO356_25970	0.28	-0.2
5,870,166	+		AO356_25970	0.28	+0.6
5,870,166	+		AO356_25970	0.28	+0.7
5,870,167	-		AO356_25970	0.28	+0.3
5,870,167	-		AO356_25970	0.28	+0.4
5,870,177	+		AO356_25970	0.30	+1.3
5,870,177	+		AO356_25970	0.30	-0.5
5,870,178	-		AO356_25970	0.30	+0.4
5,870,178	-		AO356_25970	0.30	+0.9
5,870,213	+		AO356_25970	0.34	+1.1
5,870,214	-		AO356_25970	0.34	+0.4
5,870,214	-		AO356_25970	0.34	+0.7
5,870,214	-		AO356_25970	0.34	+0.3
5,870,238	+		AO356_25970	0.36	+0.6
5,870,238	+		AO356_25970	0.36	-0.1