Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_24040

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
5,389,476	-				-0.2
5,389,761	+				+0.4
5,389,957	+		AO356_24035	0.25	+0.0
5,389,957	+		AO356_24035	0.25	-0.1
5,389,957	+		AO356_24035	0.25	+0.6
5,389,957	+		AO356_24035	0.25	-0.2
5,389,957	+		AO356_24035	0.25	-0.8
5,389,957	+		AO356_24035	0.25	+0.0
5,389,958	-		AO356_24035	0.25	+0.7
5,389,958	-		AO356_24035	0.25	-0.4
5,389,958	-		AO356_24035	0.25	+0.2
5,389,958	-		AO356_24035	0.25	+0.5
5,389,958	-		AO356_24035	0.25	-0.0
5,389,958	-		AO356_24035	0.25	-0.6
5,389,958	-		AO356_24035	0.25	+1.4
5,389,958	-		AO356_24035	0.25	-0.2
5,390,068	+		AO356_24035	0.46	-1.5
5,390,068	+		AO356_24035	0.46	-0.3
5,390,068	+		AO356_24035	0.46	+0.2
5,390,068	+		AO356_24035	0.46	+0.7
5,390,069	-		AO356_24035	0.46	-0.1
5,390,069	-		AO356_24035	0.46	+1.6
5,390,091	+		AO356_24035	0.51	-0.5
5,390,126	-		AO356_24035	0.57	-0.0
5,390,126	-		AO356_24035	0.57	+0.3
5,390,300	+				-0.3
5,390,301	-				+0.8
5,390,301	-				-0.4
5,390,301	-				+0.1
5,390,344	+				+0.5
5,390,345	-				-0.4
5,390,345	-				+1.3
5,390,345	-				+0.6
5,390,345	-				-0.5
5,390,391	-				-0.2
5,390,395	-				+0.7
5,390,472	+				-0.3
5,390,472	+				+0.5
5,390,472	+				+1.4
5,390,472	+				+0.6
5,390,472	+				+0.7
5,390,472	+				-0.2
5,390,473	-				-0.6
5,390,524	+				-0.2
5,390,525	-				+0.8
5,390,634	+		AO356_24040	0.15	-1.6
5,390,635	-		AO356_24040	0.15	+0.9
5,390,647	+		AO356_24040	0.16	-0.4
5,390,678	+		AO356_24040	0.19	+0.7
5,390,679	-		AO356_24040	0.19	-0.7
5,390,695	+		AO356_24040	0.21	-0.0
5,390,696	-		AO356_24040	0.21	-0.7
5,390,696	-		AO356_24040	0.21	+0.1
5,390,696	-		AO356_24040	0.21	+0.9
5,390,704	+		AO356_24040	0.22	+0.1
5,390,838	+		AO356_24040	0.34	+1.5
5,390,838	+		AO356_24040	0.34	+0.0
5,390,839	-		AO356_24040	0.34	-0.9
5,390,842	+		AO356_24040	0.34	+0.3
5,390,842	+		AO356_24040	0.34	+0.8
5,390,843	-		AO356_24040	0.34	+0.5
5,391,587	+				+0.1
5,391,587	+				-0.1
5,391,587	+				-0.0
5,391,588	-				-0.2
5,391,588	-				-0.0
5,391,588	-				+0.5
5,391,588	-				-0.0
5,391,588	-				+0.2
5,391,588	-				+0.0
5,391,588	-				-0.4
5,391,599	+				-0.6
5,391,600	-				-1.3
5,391,600	-				-0.0
5,391,677	+				+0.3
5,391,704	+				+1.8
5,391,704	+				-0.7
5,391,704	+				-1.4
5,391,704	+				-0.3
5,391,705	-				+1.4
5,391,761	+		AO356_24045	0.15	-0.6
5,391,761	+		AO356_24045	0.15	-0.7
5,391,812	+		AO356_24045	0.19	-0.2
5,391,812	+		AO356_24045	0.19	+0.4
5,391,813	-		AO356_24045	0.20	+0.5
5,391,813	-		AO356_24045	0.20	+0.1
5,391,813	-		AO356_24045	0.20	-0.8
5,391,813	-		AO356_24045	0.20	-0.2
5,391,890	+		AO356_24045	0.27	+0.3
5,391,890	+		AO356_24045	0.27	+0.5
5,391,891	-		AO356_24045	0.27	+0.1
5,391,917	+		AO356_24045	0.30	+0.7
5,391,918	-		AO356_24045	0.30	+0.8
5,391,918	-		AO356_24045	0.30	-1.1
5,391,918	-		AO356_24045	0.30	+0.1
5,391,918	-		AO356_24045	0.30	+0.3
5,391,922	+		AO356_24045	0.30	-1.6
5,391,922	+		AO356_24045	0.30	-0.3
5,391,922	+		AO356_24045	0.30	+0.1
5,391,922	+		AO356_24045	0.30	+0.9
5,391,923	-		AO356_24045	0.30	-0.4
5,392,006	+		AO356_24045	0.38	+0.8
5,392,006	+		AO356_24045	0.38	+0.4
5,392,007	-		AO356_24045	0.38	-0.2
5,392,352	+		AO356_24045	0.71	+0.5
5,392,499	+		AO356_24045	0.85	+0.1
5,392,499	+		AO356_24045	0.85	+0.3
5,392,499	+		AO356_24045	0.85	+1.4
5,392,499	+		AO356_24045	0.85	+0.7
5,392,499	+		AO356_24045	0.85	+0.5
5,392,499	+		AO356_24045	0.85	-0.0
5,392,500	-		AO356_24045	0.85	-1.9
5,392,500	-		AO356_24045	0.85	-0.5
5,392,501	+		AO356_24045	0.85	+1.1
5,392,501	+		AO356_24045	0.85	-0.2
5,392,501	+		AO356_24045	0.85	+0.5
5,392,501	+		AO356_24045	0.85	-0.9
5,392,501	+		AO356_24045	0.85	-0.9
5,392,501	+		AO356_24045	0.85	-0.2
5,392,501	+		AO356_24045	0.85	-0.9
5,392,501	+		AO356_24045	0.85	+0.9
5,392,501	+		AO356_24045	0.85	+0.4
5,392,502	-		AO356_24045	0.85	-0.5
5,392,502	-		AO356_24045	0.85	-1.2
5,392,502	-		AO356_24045	0.85	-0.3
5,392,502	-		AO356_24045	0.85	+0.4