Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_22550

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
5,038,154	+				+1.3
5,038,155	-				-1.2
5,038,155	-				-1.3
5,038,216	+				-0.4
5,038,217	-				-0.1
5,038,217	-				-0.8
5,038,309	+		AO356_22545	0.14	-0.1
5,038,309	+		AO356_22545	0.14	+1.1
5,038,309	+		AO356_22545	0.14	-1.2
5,038,310	-		AO356_22545	0.14	+0.5
5,038,310	-		AO356_22545	0.14	+0.3
5,038,310	-		AO356_22545	0.14	-1.2
5,038,310	-		AO356_22545	0.14	-0.7
5,038,310	-		AO356_22545	0.14	+0.6
5,038,310	-		AO356_22545	0.14	+0.6
5,038,310	-		AO356_22545	0.14	-1.1
5,038,386	+		AO356_22545	0.22	+0.4
5,038,386	+		AO356_22545	0.22	-0.5
5,038,387	-		AO356_22545	0.22	+0.0
5,038,409	-		AO356_22545	0.24	-0.3
5,038,451	+		AO356_22545	0.29	+0.5
5,038,533	+		AO356_22545	0.38	+0.5
5,038,533	+		AO356_22545	0.38	+0.5
5,038,533	+		AO356_22545	0.38	+0.0
5,038,533	+		AO356_22545	0.38	-0.1
5,038,533	+		AO356_22545	0.38	-0.2
5,038,534	-		AO356_22545	0.38	-0.2
5,038,547	+		AO356_22545	0.39	-1.2
5,038,547	+		AO356_22545	0.39	-0.2
5,038,547	+		AO356_22545	0.39	+0.2
5,038,547	+		AO356_22545	0.39	-1.3
5,038,548	-		AO356_22545	0.39	-0.2
5,038,548	-		AO356_22545	0.39	+0.1
5,038,548	-		AO356_22545	0.39	-0.1
5,038,594	+		AO356_22545	0.44	+1.2
5,038,594	+		AO356_22545	0.44	+0.2
5,038,595	-		AO356_22545	0.44	+0.5
5,038,595	-		AO356_22545	0.44	-0.4
5,038,595	-		AO356_22545	0.44	+1.6
5,038,641	-		AO356_22545	0.49	-0.3
5,038,661	+		AO356_22545	0.51	+0.7
5,038,661	+		AO356_22545	0.51	-0.3
5,038,662	-		AO356_22545	0.51	+1.1
5,038,662	-		AO356_22545	0.51	-0.8
5,038,728	-		AO356_22545	0.58	+0.5
5,038,779	+		AO356_22545	0.64	+0.5
5,038,779	+		AO356_22545	0.64	-0.3
5,038,780	-		AO356_22545	0.64	-0.3
5,038,780	-		AO356_22545	0.64	+0.9
5,038,793	-		AO356_22545	0.65	+0.0
5,038,815	+		AO356_22545	0.68	-1.0
5,038,815	+		AO356_22545	0.68	-2.1
5,038,816	-		AO356_22545	0.68	-0.6
5,038,816	-		AO356_22545	0.68	-0.8
5,038,816	-		AO356_22545	0.68	-0.4
5,038,816	-		AO356_22545	0.68	+1.5
5,038,816	-		AO356_22545	0.68	-0.4
5,038,816	-		AO356_22545	0.68	+0.5
5,038,816	-		AO356_22545	0.68	-0.1
5,038,823	+		AO356_22545	0.69	-0.1
5,038,823	+		AO356_22545	0.69	+0.0
5,038,856	+		AO356_22545	0.72	-1.1
5,038,991	-		AO356_22545	0.86	-0.5
5,039,115	+				+0.5
5,039,275	+		AO356_22550	0.30	-0.1
5,039,276	-		AO356_22550	0.30	+0.4
5,039,309	+		AO356_22550	0.37	+0.6
5,039,310	-		AO356_22550	0.37	-0.1
5,039,310	-		AO356_22550	0.37	-0.5
5,039,310	-		AO356_22550	0.37	+0.5
5,039,310	-		AO356_22550	0.37	-0.5
5,039,349	-		AO356_22550	0.46	-0.3
5,039,378	+		AO356_22550	0.52	-0.3
5,039,379	-		AO356_22550	0.52	+0.4
5,039,452	+		AO356_22550	0.68	-1.0
5,039,493	+		AO356_22550	0.77	-0.1
5,039,493	+		AO356_22550	0.77	+0.5
5,039,494	-		AO356_22550	0.77	-1.3
5,039,494	-		AO356_22550	0.77	+0.1
5,039,495	+		AO356_22550	0.77	-1.1
5,039,495	+		AO356_22550	0.77	-0.6
5,039,495	+		AO356_22550	0.77	+0.1
5,039,495	+		AO356_22550	0.77	+0.5
5,039,495	+		AO356_22550	0.77	+0.9
5,039,495	+		AO356_22550	0.77	-0.5
5,039,495	+		AO356_22550	0.77	+0.4
5,039,495	+		AO356_22550	0.77	+0.3
5,039,496	-		AO356_22550	0.78	-0.5
5,039,496	-		AO356_22550	0.78	+0.3
5,039,496	-		AO356_22550	0.78	-1.7
5,039,496	-		AO356_22550	0.78	+0.7
5,039,496	-		AO356_22550	0.78	+0.0
5,039,496	-		AO356_22550	0.78	+0.7
5,039,496	-		AO356_22550	0.78	-0.3
5,039,496	-		AO356_22550	0.78	-0.1
5,039,496	-		AO356_22550	0.78	+0.0
5,039,534	+		AO356_22550	0.86	-1.0
5,039,535	-		AO356_22550	0.86	-0.0
5,039,535	-		AO356_22550	0.86	-1.2
5,039,562	-				-0.3
5,039,665	+				+0.5
5,039,665	+				+1.6
5,039,665	+				+0.3
5,039,666	-				+0.2
5,039,860	-				-0.1
5,039,895	+				+0.3
5,039,896	-				+0.6
5,040,061	+		AO356_22555	0.27	+0.5
5,040,061	+		AO356_22555	0.27	-0.3
5,040,080	+		AO356_22555	0.30	-1.3
5,040,081	-		AO356_22555	0.30	+0.2
5,040,090	+		AO356_22555	0.32	+0.1
5,040,091	-		AO356_22555	0.32	+0.2
5,040,201	+		AO356_22555	0.48	+0.1
5,040,202	-		AO356_22555	0.48	-0.9
5,040,202	-		AO356_22555	0.48	+1.2
5,040,202	-		AO356_22555	0.48	+1.2
5,040,226	+		AO356_22555	0.51	-0.1
5,040,226	+		AO356_22555	0.51	-0.5
5,040,226	+		AO356_22555	0.51	+0.9
5,040,227	-		AO356_22555	0.52	-1.2
5,040,227	-		AO356_22555	0.52	+0.1
5,040,227	-		AO356_22555	0.52	-0.2
5,040,227	-		AO356_22555	0.52	-1.0
5,040,229	+		AO356_22555	0.52	+0.5
5,040,229	+		AO356_22555	0.52	-0.2
5,040,230	-		AO356_22555	0.52	+0.4
5,040,230	-		AO356_22555	0.52	+0.8
5,040,275	+		AO356_22555	0.59	-0.5
5,040,275	+		AO356_22555	0.59	+0.0
5,040,276	-		AO356_22555	0.59	+0.4
5,040,276	-		AO356_22555	0.59	+0.1
5,040,276	-		AO356_22555	0.59	-0.0
5,040,276	-		AO356_22555	0.59	-0.7
5,040,276	-		AO356_22555	0.59	+0.5
5,040,419	+		AO356_22555	0.79	+0.2
5,040,419	+		AO356_22555	0.79	+0.5
5,040,420	-		AO356_22555	0.80	+0.9
5,040,420	-		AO356_22555	0.80	+0.4
5,040,462	-		AO356_22555	0.86	-1.2
5,040,462	-		AO356_22555	0.86	+0.4
5,040,485	+		AO356_22555	0.89	-0.4
5,040,485	+		AO356_22555	0.89	-0.8
5,040,485	+		AO356_22555	0.89	+0.4
5,040,486	-		AO356_22555	0.89	-1.7
5,040,486	-		AO356_22555	0.89	-0.2
5,040,486	-		AO356_22555	0.89	-0.2
5,040,486	-		AO356_22555	0.89	+0.1
5,040,486	-		AO356_22555	0.89	+0.5
5,040,486	-		AO356_22555	0.89	+0.2
5,040,486	-		AO356_22555	0.89	-0.4
5,040,516	+				-1.3
5,040,517	-				-0.9
5,040,577	+				-0.6
5,040,577	+				+0.5
5,040,578	-				+1.0
5,040,578	-				+0.6
5,040,578	-				-0.4
5,040,578	-				+0.6