Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_22540

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
5,036,640	+		AO356_22530	0.82	+0.1
5,036,640	+		AO356_22530	0.82	+0.3
5,036,640	+		AO356_22530	0.82	-0.1
5,036,641	-		AO356_22530	0.82	+0.4
5,036,703	+		AO356_22530	0.89	+0.6
5,036,726	+				+0.1
5,036,776	+				+0.2
5,036,852	+				+0.6
5,036,859	+				+0.4
5,036,859	+				+1.2
5,036,885	-				+1.2
5,036,924	+				+0.4
5,036,925	-				+0.1
5,036,978	+				+0.3
5,037,110	-		AO356_22535	0.40	-2.5
5,037,128	-		AO356_22535	0.44	-1.9
5,037,205	-		AO356_22535	0.63	+0.4
5,037,205	-		AO356_22535	0.63	-0.5
5,037,236	+		AO356_22535	0.71	+0.7
5,037,237	-		AO356_22535	0.71	+0.3
5,037,248	+		AO356_22535	0.74	+1.2
5,037,248	+		AO356_22535	0.74	-0.2
5,037,248	+		AO356_22535	0.74	-0.1
5,037,248	+		AO356_22535	0.74	-0.1
5,037,248	+		AO356_22535	0.74	+0.8
5,037,248	+		AO356_22535	0.74	+0.7
5,037,248	+		AO356_22535	0.74	+1.8
5,037,248	+		AO356_22535	0.74	+0.2
5,037,248	+		AO356_22535	0.74	-0.5
5,037,248	+		AO356_22535	0.74	+0.7
5,037,248	+		AO356_22535	0.74	+0.9
5,037,248	+		AO356_22535	0.74	-2.0
5,037,249	-		AO356_22535	0.74	+0.6
5,037,249	-		AO356_22535	0.74	+0.3
5,037,249	-		AO356_22535	0.74	-1.5
5,037,249	-		AO356_22535	0.74	-0.1
5,037,249	-		AO356_22535	0.74	+1.1
5,037,261	+		AO356_22535	0.77	-1.2
5,037,356	+				-0.6
5,037,357	-				+0.7
5,037,537	+				-0.2
5,037,538	-				+0.5
5,037,538	-				+0.7
5,037,538	-				-0.9
5,037,538	-				+0.9
5,037,538	-				+0.4
5,037,538	-				-0.6
5,037,558	-				+1.0
5,037,597	+				-0.0
5,037,597	+				-0.7
5,037,597	+				-0.2
5,037,598	-				+0.1
5,037,598	-				-1.0
5,037,598	-				+0.5
5,037,598	-				+0.4
5,037,598	-				-0.1
5,037,601	+				-0.1
5,037,601	+				-0.6
5,037,601	+				-0.2
5,037,601	+				+0.2
5,037,602	-				+0.1
5,037,602	-				+0.2
5,037,602	-				+1.7
5,037,602	-				-0.5
5,037,602	-				-0.1
5,037,636	+		AO356_22540	0.20	+0.2
5,037,636	+		AO356_22540	0.20	-0.1
5,037,637	-		AO356_22540	0.20	-1.1
5,037,668	+		AO356_22540	0.30	+0.3
5,037,669	-		AO356_22540	0.30	+0.5
5,037,691	-		AO356_22540	0.38	-0.3
5,037,691	-		AO356_22540	0.38	+0.2
5,037,691	-		AO356_22540	0.38	-1.5
5,037,691	-		AO356_22540	0.38	-0.7
5,037,726	+		AO356_22540	0.49	-0.7
5,037,726	+		AO356_22540	0.49	-0.5
5,037,727	-		AO356_22540	0.49	-1.5
5,037,760	-		AO356_22540	0.60	+0.0
5,037,760	-		AO356_22540	0.60	+0.1
5,037,769	-		AO356_22540	0.63	+0.6
5,037,788	-		AO356_22540	0.69	-0.3
5,037,847	-		AO356_22540	0.89	+0.8
5,037,847	-		AO356_22540	0.89	+1.3
5,037,847	-		AO356_22540	0.89	-0.9
5,037,956	-				+0.3
5,037,979	+				-0.3
5,037,979	+				-1.3
5,037,980	-				-0.1
5,037,980	-				+0.3
5,038,015	+				+0.2
5,038,015	+				+0.0
5,038,015	+				-0.6
5,038,016	-				+0.4
5,038,016	-				-0.9
5,038,079	+				+0.7
5,038,079	+				+0.9
5,038,080	-				-0.9
5,038,080	-				+2.2
5,038,116	+				+0.9
5,038,116	+				+1.5
5,038,116	+				-0.7
5,038,116	+				+0.6
5,038,116	+				-0.2
5,038,117	-				-0.1
5,038,123	+				-0.2
5,038,123	+				-2.2
5,038,123	+				-0.7
5,038,124	-				-0.0
5,038,124	-				-0.6
5,038,124	-				-0.0
5,038,124	-				-1.5
5,038,154	+				+1.3
5,038,155	-				-1.2
5,038,155	-				-1.3
5,038,216	+				-0.4
5,038,217	-				-0.1
5,038,217	-				-0.8
5,038,309	+		AO356_22545	0.14	-0.1
5,038,309	+		AO356_22545	0.14	+1.1
5,038,309	+		AO356_22545	0.14	-1.2
5,038,310	-		AO356_22545	0.14	+0.5
5,038,310	-		AO356_22545	0.14	+0.3
5,038,310	-		AO356_22545	0.14	-1.2
5,038,310	-		AO356_22545	0.14	-0.7
5,038,310	-		AO356_22545	0.14	+0.6
5,038,310	-		AO356_22545	0.14	+0.6
5,038,310	-		AO356_22545	0.14	-1.1
5,038,386	+		AO356_22545	0.22	+0.4
5,038,386	+		AO356_22545	0.22	-0.5
5,038,387	-		AO356_22545	0.22	+0.0
5,038,409	-		AO356_22545	0.24	-0.3
5,038,451	+		AO356_22545	0.29	+0.5
5,038,533	+		AO356_22545	0.38	+0.5
5,038,533	+		AO356_22545	0.38	+0.5
5,038,533	+		AO356_22545	0.38	+0.0
5,038,533	+		AO356_22545	0.38	-0.1
5,038,533	+		AO356_22545	0.38	-0.2
5,038,534	-		AO356_22545	0.38	-0.2
5,038,547	+		AO356_22545	0.39	-1.2
5,038,547	+		AO356_22545	0.39	-0.2
5,038,547	+		AO356_22545	0.39	+0.2
5,038,547	+		AO356_22545	0.39	-1.3
5,038,548	-		AO356_22545	0.39	-0.2
5,038,548	-		AO356_22545	0.39	+0.1
5,038,548	-		AO356_22545	0.39	-0.1
5,038,594	+		AO356_22545	0.44	+1.2
5,038,594	+		AO356_22545	0.44	+0.2
5,038,595	-		AO356_22545	0.44	+0.5
5,038,595	-		AO356_22545	0.44	-0.4
5,038,595	-		AO356_22545	0.44	+1.6
5,038,641	-		AO356_22545	0.49	-0.3
5,038,661	+		AO356_22545	0.51	+0.7
5,038,661	+		AO356_22545	0.51	-0.3
5,038,662	-		AO356_22545	0.51	+1.1
5,038,662	-		AO356_22545	0.51	-0.8
5,038,728	-		AO356_22545	0.58	+0.5
5,038,779	+		AO356_22545	0.64	+0.5
5,038,779	+		AO356_22545	0.64	-0.3
5,038,780	-		AO356_22545	0.64	-0.3
5,038,780	-		AO356_22545	0.64	+0.9
5,038,793	-		AO356_22545	0.65	+0.0
5,038,815	+		AO356_22545	0.68	-1.0
5,038,815	+		AO356_22545	0.68	-2.1
5,038,816	-		AO356_22545	0.68	-0.6
5,038,816	-		AO356_22545	0.68	-0.8
5,038,816	-		AO356_22545	0.68	-0.4
5,038,816	-		AO356_22545	0.68	+1.5
5,038,816	-		AO356_22545	0.68	-0.4
5,038,816	-		AO356_22545	0.68	+0.5
5,038,816	-		AO356_22545	0.68	-0.1
5,038,823	+		AO356_22545	0.69	-0.1
5,038,823	+		AO356_22545	0.69	+0.0
5,038,856	+		AO356_22545	0.72	-1.1