Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_20975

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
4,667,698	+		AO356_20965	0.57	+0.1
4,667,699	-		AO356_20965	0.57	-2.5
4,667,699	-		AO356_20965	0.57	+0.9
4,667,822	+		AO356_20965	0.74	+0.4
4,667,822	+		AO356_20965	0.74	+0.3
4,667,823	-		AO356_20965	0.74	+0.2
4,667,823	-		AO356_20965	0.74	+2.2
4,667,823	-		AO356_20965	0.74	+1.5
4,667,991	+				-0.1
4,667,992	-				+0.1
4,667,992	-				-0.6
4,668,002	+				+0.4
4,668,002	+				+0.3
4,668,002	+				+2.2
4,668,002	+				-0.0
4,668,003	-				+0.9
4,668,005	+				-0.1
4,668,005	+				-0.4
4,668,005	+				+0.3
4,668,005	+				+0.0
4,668,005	+				+0.4
4,668,006	-				-0.5
4,668,006	-				+0.7
4,668,006	-				+0.3
4,668,108	-				+0.5
4,668,187	+		AO356_20970	0.15	-1.4
4,668,242	+		AO356_20970	0.25	-0.7
4,668,242	+		AO356_20970	0.25	-0.1
4,668,242	+		AO356_20970	0.25	+0.2
4,668,242	+		AO356_20970	0.25	+0.4
4,668,243	-		AO356_20970	0.25	-1.2
4,668,243	-		AO356_20970	0.25	-2.3
4,668,371	+		AO356_20970	0.47	-0.2
4,668,372	-		AO356_20970	0.48	-0.9
4,668,372	-		AO356_20970	0.48	+0.4
4,668,372	-		AO356_20970	0.48	-1.2
4,668,678	+				-0.2
4,668,678	+				-0.5
4,668,679	-				+0.3
4,668,679	-				-0.7
4,668,679	-				+1.4
4,668,679	-				-0.4
4,668,679	-				+0.0
4,668,709	+		AO356_20975	0.11	+1.1
4,668,710	-		AO356_20975	0.12	+1.2
4,668,711	+		AO356_20975	0.12	-0.7
4,668,712	-		AO356_20975	0.12	+0.2
4,668,712	-		AO356_20975	0.12	+0.5
4,668,786	+		AO356_20975	0.39	-0.4
4,668,786	+		AO356_20975	0.39	-0.1
4,668,786	+		AO356_20975	0.39	-2.0
4,668,786	+		AO356_20975	0.39	+0.2
4,668,786	+		AO356_20975	0.39	-0.2
4,668,786	+		AO356_20975	0.39	+0.9
4,668,787	-		AO356_20975	0.39	+0.3
4,668,787	-		AO356_20975	0.39	+0.4
4,668,787	-		AO356_20975	0.39	+0.3
4,668,930	-				+0.1
4,668,969	-				+0.3
4,668,969	-				+1.0
4,668,969	-				+0.7
4,668,986	+				+0.7
4,668,986	+				+0.0
4,668,986	+				+0.8
4,668,986	+				+0.8
4,668,986	+				+0.1
4,668,987	-				+0.1
4,668,987	-				-0.1
4,668,987	-				+0.5
4,669,039	+				-1.2
4,669,039	+				-0.0
4,669,039	+				-0.4
4,669,063	+				+0.9
4,669,063	+				+0.4
4,669,064	-				+0.7
4,669,064	-				+0.1
4,669,076	+				-0.9
4,669,134	-				+0.3
4,669,204	+				-0.3
4,669,204	+				+0.3
4,669,204	+				-1.0
4,669,205	-				+0.7
4,669,233	+		AO356_20980	0.12	-0.4
4,669,233	+		AO356_20980	0.12	+0.4
4,669,233	+		AO356_20980	0.12	-0.2
4,669,233	+		AO356_20980	0.12	-0.2
4,669,233	+		AO356_20980	0.12	-1.7
4,669,233	+		AO356_20980	0.12	+0.7
4,669,233	+		AO356_20980	0.12	+0.1
4,669,233	+		AO356_20980	0.12	+0.6
4,669,233	+		AO356_20980	0.12	-0.1
4,669,233	+		AO356_20980	0.12	+0.2
4,669,234	-		AO356_20980	0.12	-0.0
4,669,234	-		AO356_20980	0.12	+1.0
4,669,234	-		AO356_20980	0.12	+0.1
4,669,234	-		AO356_20980	0.12	+0.4
4,669,234	-		AO356_20980	0.12	-3.4
4,669,234	-		AO356_20980	0.12	+1.1
4,669,234	-		AO356_20980	0.12	+0.8
4,669,435	+		AO356_20980	0.35	+0.2
4,669,435	+		AO356_20980	0.35	+0.6
4,669,435	+		AO356_20980	0.35	+0.1
4,669,524	+		AO356_20980	0.45	+0.7
4,669,524	+		AO356_20980	0.45	+0.4
4,669,524	+		AO356_20980	0.45	-0.7
4,669,524	+		AO356_20980	0.45	+0.6
4,669,524	+		AO356_20980	0.45	-0.5
4,669,524	+		AO356_20980	0.45	+0.7
4,669,524	+		AO356_20980	0.45	-0.1
4,669,524	+		AO356_20980	0.45	-0.3
4,669,525	-		AO356_20980	0.45	-0.7
4,669,525	-		AO356_20980	0.45	-1.4
4,669,525	-		AO356_20980	0.45	-0.7
4,669,525	-		AO356_20980	0.45	-0.2
4,669,525	-		AO356_20980	0.45	-1.2
4,669,525	-		AO356_20980	0.45	+0.7
4,669,525	-		AO356_20980	0.45	+0.6
4,669,604	+		AO356_20980	0.54	+0.6
4,669,671	+		AO356_20980	0.61	+0.4
4,669,672	-		AO356_20980	0.61	+0.2
4,669,672	-		AO356_20980	0.61	-0.1
4,669,672	-		AO356_20980	0.61	-1.1
4,669,672	-		AO356_20980	0.61	+0.2
4,669,672	-		AO356_20980	0.61	-0.6
4,669,744	+		AO356_20980	0.69	-0.3
4,669,744	+		AO356_20980	0.69	-0.7
4,669,745	-		AO356_20980	0.69	-1.2
4,669,745	-		AO356_20980	0.69	+0.1
4,669,745	-		AO356_20980	0.69	+0.4
4,669,746	+		AO356_20980	0.69	-0.0
4,669,746	+		AO356_20980	0.69	-1.6
4,669,746	+		AO356_20980	0.69	-0.0
4,669,746	+		AO356_20980	0.69	+0.8
4,669,746	+		AO356_20980	0.69	-1.0
4,669,746	+		AO356_20980	0.69	+0.1
4,669,746	+		AO356_20980	0.69	+0.5
4,669,746	+		AO356_20980	0.69	+0.8
4,669,746	+		AO356_20980	0.69	+0.1
4,669,746	+		AO356_20980	0.69	+0.0
4,669,746	+		AO356_20980	0.69	-0.0
4,669,746	+		AO356_20980	0.69	+0.1
4,669,747	-		AO356_20980	0.70	+0.2
4,669,747	-		AO356_20980	0.70	+0.4
4,669,747	-		AO356_20980	0.70	-0.6
4,669,747	-		AO356_20980	0.70	+0.2
4,669,747	-		AO356_20980	0.70	-0.0
4,669,747	-		AO356_20980	0.70	+0.2
4,669,747	-		AO356_20980	0.70	+1.1
4,669,747	-		AO356_20980	0.70	+0.5
4,669,747	-		AO356_20980	0.70	+0.3
4,669,747	-		AO356_20980	0.70	+0.3
4,669,747	-		AO356_20980	0.70	-0.3
4,669,762	+		AO356_20980	0.71	+1.2
4,669,762	+		AO356_20980	0.71	-0.5
4,669,782	+		AO356_20980	0.74	-1.6
4,669,835	+		AO356_20980	0.79	+0.1
4,669,836	-		AO356_20980	0.80	+1.3
4,669,836	-		AO356_20980	0.80	+0.7
4,669,883	-		AO356_20980	0.85	+0.7
4,669,883	-		AO356_20980	0.85	-0.7
4,669,955	+				+0.6
4,669,956	-				-0.4